SEQanswers - Threads Tagged with alignment

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Threads Tagged with alignment

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Threads Tagged with alignment
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Sequencing Human/Mouse ATAC libraries together? ETBA	08-03-2020 03:47 PM by ETBA	4	1,574	Sample Prep / Library Generation
	Wrong blast results boldretriever	03-04-2020 05:59 AM by boldretriever	0	888	Bioinformatics
	Wrong bwa alignment? radood	10-30-2019 01:37 PM by radood	3	2,581	Bioinformatics
	Aligning only unique reads in Bowtie gzentner	07-07-2019 07:07 AM by brojee	6	6,810	Bioinformatics
	Difficulty aligning to reference with AVA cog	07-07-2019 06:16 AM by brojee	8	9,713	Bioinformatics
	Is it possible to print DNA sequences of subject organism in tblastn? dineshkumarsrk	04-05-2019 11:50 PM by dineshkumarsrk	0	1,549	Bioinformatics
	New to bioinformatics - Read Alignment/Mapping hiatus	11-28-2018 06:20 AM by hiatus	6	2,095	Bioinformatics
	featureCounts output to DESeq2? lucyf	10-11-2018 03:48 AM by lucyf	0	2,834	Bioinformatics
	Tool for grouping sequences into clusters with homology within each above threshold prishlyK	10-09-2018 02:12 AM by prishlyK	2	2,662	Bioinformatics
	HTSeq-count returns all 0's? lucyf	10-08-2018 12:50 AM by lucyf	0	1,879	Bioinformatics
	Bismark - A New Tool for Mapping and Analysis of Bisulfite-Seq Data ( 1 2 3 ... Last Page) fkrueger	10-05-2018 01:43 AM by akramdi	648	193,638	Bioinformatics
	Bowtie 2 explanation of the pair-end mode report wariobrega	07-18-2018 10:57 PM by gopal_botany	12	30,926	Bioinformatics
	cufflinks: input alignment from hisat2 dovah	05-09-2018 01:09 AM by sahusarika	5	6,937	RNA Sequencing
	STAR: ultrafast universal RNA-seq aligner ( 1 2 3 ... Last Page) alexdobin	04-02-2018 05:59 PM by drdna	218	151,063	Bioinformatics
	Remapping reads ekageyama	02-07-2018 09:29 PM by Dario1984	4	2,347	Bioinformatics
	RNA-Seq Data Analysis Workshop in Berlin, Germany ecSeq Bioinformatics	02-05-2018 04:24 AM by ecSeq Bioinformatics	2	3,380	Bioinformatics
	Alternative to CLC Genomics Workbench viewer k-gun12	02-03-2018 11:57 AM by gringer	4	8,274	Bioinformatics
	Could not locate a bowtie index corresponding to basename -- tried posted solutions ng1812	01-17-2018 08:28 PM by ng1812	0	3,037	Bioinformatics
	Optimal balance of threads for alignment & sorting? afkoeppel	11-27-2017 11:36 AM by afkoeppel	0	1,919	Bioinformatics
	Hisat2 vs Tophat2 variation between tech reps kuristy	10-04-2017 01:23 PM by kuristy	1	2,484	Bioinformatics
	Arioc: GPU-accelerated short-read alignment for BS-seq data RWilton	08-13-2017 07:17 PM by RWilton	0	1,902	Bioinformatics
	How to align multiple genomic regions simultaneously liaoyunshi	08-07-2017 03:28 AM by GenoMax	1	1,735	Bioinformatics
	HISAT2: advantages of build index using annotated transcripts dekontrol	06-22-2017 10:41 PM by dekontrol	0	3,184	Bioinformatics
	Can't find show-aligns in mummer cr517	06-07-2017 02:33 AM by cr517	0	1,872	Bioinformatics
	extended cigar in bwa-mem dovah	06-02-2017 04:27 AM by sklages	7	4,486	Bioinformatics
	RNA-seq alignment on novel region icanwinwyz	04-19-2017 10:58 AM by icanwinwyz	0	2,069	Bioinformatics
	Quality trimming prior to aligning gstone	03-02-2017 09:09 AM by Brian Bushnell	5	4,707	Bioinformatics
	Webinar: Sequence alignment: the central step in reference based NGS data analysis Persistent LABS	01-18-2017 08:08 PM by Persistent LABS	1	2,781	Bioinformatics
	Hisat2: Differing amount of reads in mates ronaldrcutler	12-21-2016 03:59 PM by dcameron	3	4,168	Bioinformatics
	Aligning Reads with Overhangs on the Ends (Edges) of Reference Contigs or Scaffolds Fatih	12-01-2016 03:23 AM by Fatih	0	2,649	Bioinformatics

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