SEQanswers - Threads Tagged with bam

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Threads Tagged with bam

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Threads Tagged with bam
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	SAM/BAM MD tag davetang	07-08-2020 02:34 PM by ihoskins	7	16,002	Bioinformatics
	Combining multiple bams without losing library size information? Mic23	04-30-2020 12:50 AM by Mic23	0	910	Bioinformatics
	Subsample regions of too high coverage sbrohee	01-27-2020 02:13 AM by nazen	2	2,782	Bioinformatics
	How to merge two vcf files. cardillox	11-27-2019 09:25 PM by SNPsaurus	3	4,857	Bioinformatics
	PacBio raw .bam file anotherSAM	10-06-2019 06:15 AM by cement_head	17	13,103	Pacific Biosciences
	Working with BAM files deKoch13	03-11-2019 06:37 AM by GenoMax	5	2,330	General
	Getting protein fasta from RNAseq BAM file (human) paying attention on repeats pauli.pauli	01-12-2019 01:13 AM by pauli.pauli	0	1,888	Bioinformatics
	Can I see the detailed information of off-target reads of sequencing on NextSeq 500? mhmtgenc	12-19-2018 04:58 AM by mhmtgenc	0	1,914	Illumina/Solexa
	Filtering SAM files by base quality (QUAL)? JPreston	10-17-2018 10:03 PM by MNMoller	14	6,918	Bioinformatics
	How to get a report like stuff of a bam file how many percent of the exons are cover mhmtgenc	08-11-2018 05:48 PM by anoopkmr	4	3,254	Bioinformatics
	Microarray data (bedGraph) to metaplot. rivered	04-24-2018 03:39 AM by rivered	2	2,529	Bioinformatics
	Question on reads mapping smallRNA-seq (100% feature coverage) Liam_Gallagher	04-20-2018 07:26 AM by Liam_Gallagher	0	2,125	Bioinformatics
	Extracting specific gene regions from BAM file using GTF LRU	04-06-2018 06:59 AM by LRU	0	1,987	Bioinformatics
	HTSeq - how do I cimport it for Cython? Proteos	03-26-2018 11:12 AM by Proteos	0	1,701	Bioinformatics
	Interpretation of Gene coverage profile from qualimap bvk	02-20-2018 02:28 AM by bvk	0	2,562	Illumina/Solexa
	UCSC Encode files issue with MAPQ and Flags Jandropu	11-27-2017 01:24 PM by Jandropu	0	1,886	Bioinformatics
	Bam file with unmapped reads from another genome than reference Vca80553	09-19-2017 02:48 PM by Brian Bushnell	5	2,628	Bioinformatics
	Filter paired end reads by ID in bam file Vca80553	09-16-2017 02:06 AM by Vca80553	0	1,970	Bioinformatics
	Correct way of merging samples for father, mother, child trio variant calling Eurioste	07-05-2017 08:01 PM by finswimmer	1	2,313	Bioinformatics
	BWA sam -> bam in pipeline Virome	05-17-2017 06:26 AM by GenoMax	5	7,926	Bioinformatics
	Fusion reads in BAM Anastaziel	04-04-2017 06:37 AM by Anastaziel	0	2,736	Bioinformatics
	Does BAM file from SRA contain aligned reads? cyber222	03-22-2017 04:43 AM by mbblack	2	3,824	Bioinformatics
	Extracting HLA-E allele sequences from BAM for gene editing emily202	03-14-2017 08:11 AM by emily202	0	2,393	Bioinformatics
	Using MAC for analysis of proteins. RobbenStijn	02-21-2017 02:46 AM by RobbenStijn	0	2,343	Bioinformatics
	Making a coverage track of ZNF778 RobbenStijn	02-21-2017 02:39 AM by RobbenStijn	6	2,712	Bioinformatics
	FASTQ must die! Long live SAM/BAM! maubp	12-14-2016 11:09 AM by RamakrishnanRS	15	13,878	Bioinformatics
	replacing CIGAR string dayhan	11-02-2016 05:50 AM by dayhan	8	5,390	Bioinformatics
	The easiest/fastest way to get from BAM to TPM or RPKM ( 1 2) feralBiologist	11-01-2016 06:50 AM by LacquerHead	22	21,142	Bioinformatics
	Liftover bam from custom amplicon to hg19 anna_vt	10-31-2016 11:23 AM by wdecoster	1	2,334	Bioinformatics
	Bug with eXpress: Unable to open input SAM file Trevaly	10-24-2016 01:21 PM by Trevaly	0	2,204	Bioinformatics

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