SEQanswers - Threads Tagged with amplicon sequencing

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Threads Tagged with amplicon sequencing

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Threads Tagged with amplicon sequencing
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	16S & 18S Deep Sequencing Request(s) cement_head	08-04-2020 10:47 PM by KevinLam	1	1,910	Service Providers
	ONCOCNV: a method to extract CNAs from amplicon (or targeted) sequencing data valeu	02-24-2018 02:03 AM by aron_iral	13	8,014	Bioinformatics
	Find_primer_sequence_and_reverse_complement_read_within_amplicon.fastq script needed kliere	01-08-2018 07:44 AM by GenoMax	1	900	Bioinformatics
	Find out if you have amplicon reads. hr3y	01-07-2018 11:09 PM by hr3y	1	961	Illumina/Solexa
	MiSeq Sequencing Short Amplicons cement_head	12-18-2017 04:09 PM by thermophile	2	1,292	Illumina/Solexa
	Multiplex PCR missing some loci/low template taylor_wilcox	11-08-2017 02:51 AM by avierstr	1	1,128	Illumina/Solexa
	Variable per tile sequence quality across amplicon-seq fastqs dross11	06-15-2017 12:58 AM by dross11	2	1,891	Illumina/Solexa
	Failed index reads with homegrown adapters RachelD	05-24-2017 01:17 PM by moatman	6	1,649	Illumina/Solexa
	incredible high memory consumption of bwa-mem on small amplicon dataset LarsB	03-08-2017 06:14 AM by GenoMax	3	1,530	Bioinformatics
	Amplicon Sequencing with Ion Torrent owik303	04-28-2016 08:36 AM by mhgseq	8	8,097	Ion Torrent
	NextSeq having problem sequencing amplicons with stretch of C Patrick_Li	04-07-2016 05:05 AM by Codemonkey	1	3,058	Illumina/Solexa
	Ampliseq panel on MiSeq ryan.england@esr.cri.nz	09-23-2015 02:55 AM by cement_head	6	4,087	Illumina/Solexa
	Amplicon consensus calling from sub-reads MinnSeq	09-21-2015 04:44 PM by MinnSeq	4	2,884	Pacific Biosciences
	NextSeq500 early results HMorrison	07-22-2015 02:29 PM by rocksd	6	3,352	Illumina/Solexa
	Understanding 16s RNA reads bio_informatics	05-15-2015 11:29 AM by bio_informatics	0	2,121	Metagenomics
	Comparing Merged Seqs to a Reference Seq lcmb	05-01-2015 11:42 AM by GenoMax	4	1,894	Bioinformatics
	Inconsistency between 16s sequencing with Illumina and qPCR Ayaka	04-16-2015 07:36 AM by Michael Love	3	2,250	Illumina/Solexa
	Access Array-Generate Tagged Primers Shakur	04-02-2015 06:24 AM by SThys	2	2,015	Illumina/Solexa
	Metagenomic amplicon sequences-to-sample misidentification description and solution LejzerowiczF	03-11-2015 10:01 PM by bunce	1	1,571	Illumina/Solexa
	Indel detection in high coverage amplicons sequenced by MiSeq lpalacios	02-24-2015 07:04 AM by alexholman	2	2,953	Bioinformatics
	Amplicon sequencing coverage calculation chin0304	01-15-2015 11:31 AM by chin0304	0	2,221	Bioinformatics
	Genomic DNA integrity importance in amplicon sequencing Ayaka	10-15-2014 12:06 PM by Baseless	3	2,019	Sample Prep / Library Generation
	TruSeq Filter Plate FPU Jenhemp	07-22-2014 07:01 PM by Jenhemp	0	2,325	Illumina/Solexa
	Suspiciously low read numbers with shotgun pipeline compared to amplicon pipeline Krisztab	03-27-2014 08:05 AM by Krisztab	0	3,988	454 Pyrosequencing
	Quantifying allele fraction of small to medium deletions in amplication sequencing brentonmar	08-08-2013 06:56 AM by chrisamiller	1	2,187	Bioinformatics
	400bp chemistry 16s Amplicons AndrewThomas	05-28-2013 04:46 AM by MrGuy	4	3,564	Ion Torrent
	Ignore PCR Duplicates in CollectTargetedPcrMetrics fongchun	02-16-2013 03:51 PM by Bukowski	5	3,510	Bioinformatics
	Targeted sequencing of anonymous regions ecrandall	02-05-2013 01:36 PM by ecrandall	0	2,034	Ion Torrent
	Long amplicons failed to sequence in MiSeq run (where shorter random DNA succeeded) JamieHeather	11-30-2012 04:59 AM by Vinz	6	3,986	Illumina/Solexa
	AmpliSeq Cancer Panel SarahNGS	10-01-2012 10:21 AM by DNADEB	10	12,108	Ion Torrent

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