SEQanswers - Threads Tagged with alignment

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Threads Tagged with alignment

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Threads Tagged with alignment
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Sequencing Human/Mouse ATAC libraries together? ETBA	08-03-2020 04:47 PM by ETBA	4	1,242	Sample Prep / Library Generation
	Wrong blast results boldretriever	03-04-2020 06:59 AM by boldretriever	0	785	Bioinformatics
	Wrong bwa alignment? radood	10-30-2019 02:37 PM by radood	3	2,374	Bioinformatics
	Aligning only unique reads in Bowtie gzentner	07-07-2019 08:07 AM by brojee	6	6,583	Bioinformatics
	Difficulty aligning to reference with AVA cog	07-07-2019 07:16 AM by brojee	8	9,529	Bioinformatics
	Is it possible to print DNA sequences of subject organism in tblastn? dineshkumarsrk	04-06-2019 12:50 AM by dineshkumarsrk	0	1,426	Bioinformatics
	New to bioinformatics - Read Alignment/Mapping hiatus	11-28-2018 07:20 AM by hiatus	6	1,967	Bioinformatics
	featureCounts output to DESeq2? lucyf	10-11-2018 04:48 AM by lucyf	0	2,648	Bioinformatics
	Tool for grouping sequences into clusters with homology within each above threshold prishlyK	10-09-2018 03:12 AM by prishlyK	2	2,542	Bioinformatics
	HTSeq-count returns all 0's? lucyf	10-08-2018 01:50 AM by lucyf	0	1,745	Bioinformatics
	Bismark - A New Tool for Mapping and Analysis of Bisulfite-Seq Data ( 1 2 3 ... Last Page) fkrueger	10-05-2018 02:43 AM by akramdi	648	190,856	Bioinformatics
	Bowtie 2 explanation of the pair-end mode report wariobrega	07-18-2018 11:57 PM by gopal_botany	12	29,766	Bioinformatics
	cufflinks: input alignment from hisat2 dovah	05-09-2018 02:09 AM by sahusarika	5	6,665	RNA Sequencing
	STAR: ultrafast universal RNA-seq aligner ( 1 2 3 ... Last Page) alexdobin	04-02-2018 06:59 PM by drdna	218	148,636	Bioinformatics
	Remapping reads ekageyama	02-07-2018 10:29 PM by Dario1984	4	2,225	Bioinformatics
	RNA-Seq Data Analysis Workshop in Berlin, Germany ecSeq Bioinformatics	02-05-2018 05:24 AM by ecSeq Bioinformatics	2	3,203	Bioinformatics
	Alternative to CLC Genomics Workbench viewer k-gun12	02-03-2018 12:57 PM by gringer	4	8,000	Bioinformatics
	Could not locate a bowtie index corresponding to basename -- tried posted solutions ng1812	01-17-2018 09:28 PM by ng1812	0	2,852	Bioinformatics
	Optimal balance of threads for alignment & sorting? afkoeppel	11-27-2017 12:36 PM by afkoeppel	0	1,803	Bioinformatics
	Hisat2 vs Tophat2 variation between tech reps kuristy	10-04-2017 02:23 PM by kuristy	1	2,358	Bioinformatics
	Arioc: GPU-accelerated short-read alignment for BS-seq data RWilton	08-13-2017 08:17 PM by RWilton	0	1,789	Bioinformatics
	How to align multiple genomic regions simultaneously liaoyunshi	08-07-2017 04:28 AM by GenoMax	1	1,628	Bioinformatics
	HISAT2: advantages of build index using annotated transcripts dekontrol	06-22-2017 11:41 PM by dekontrol	0	3,045	Bioinformatics
	Can't find show-aligns in mummer cr517	06-07-2017 03:33 AM by cr517	0	1,758	Bioinformatics
	extended cigar in bwa-mem dovah	06-02-2017 05:27 AM by sklages	7	4,245	Bioinformatics
	RNA-seq alignment on novel region icanwinwyz	04-19-2017 11:58 AM by icanwinwyz	0	1,961	Bioinformatics
	Quality trimming prior to aligning gstone	03-02-2017 10:09 AM by Brian Bushnell	5	4,443	Bioinformatics
	Webinar: Sequence alignment: the central step in reference based NGS data analysis Persistent LABS	01-18-2017 09:08 PM by Persistent LABS	1	2,663	Bioinformatics
	Hisat2: Differing amount of reads in mates ronaldrcutler	12-21-2016 04:59 PM by dcameron	3	3,942	Bioinformatics
	Aligning Reads with Overhangs on the Ends (Edges) of Reference Contigs or Scaffolds Fatih	12-01-2016 04:23 AM by Fatih	0	2,521	Bioinformatics

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