SEQanswers - Threads Tagged with coverage

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Threads Tagged with coverage

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Threads Tagged with coverage
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Size of human transcriptome/exome for coverage calculation apratap	03-30-2020 06:32 AM by AanaNahum	16	41,046	General
	How many reads/replicates do I need for bacterial RNA-seq? MiSeq? turnersd	02-14-2020 01:29 PM by dmking	4	10,588	Bioinformatics
	Subsample regions of too high coverage sbrohee	01-27-2020 03:13 AM by nazen	2	2,554	Bioinformatics
	Pooling libs. for Novaseq. How many reads/coverage? KB*	05-06-2019 06:35 PM by KB*	0	1,681	Illumina/Solexa
	Low Exome Coverage with Truseq DNA Exome and NextSeq 500 workflow? mhmtgenc	12-18-2018 12:03 AM by nucacidhunter	3	1,971	Illumina/Solexa
	Normalization from different NGS runs genferreri	09-26-2018 06:33 AM by genferreri	2	4,094	Introductions
	How to get a report like stuff of a bam file how many percent of the exons are cover mhmtgenc	08-11-2018 06:48 PM by anoopkmr	4	3,111	Bioinformatics
	Protein annotation parameters (query or subject coverage?) pedro.cabs	07-26-2018 04:17 PM by pedro.cabs	0	1,775	Bioinformatics
	BBMap pileup questions rmf	06-06-2018 05:28 AM by silask	3	3,101	Bioinformatics
	velvetg coverage parameter laura123	04-16-2018 05:32 AM by laura123	0	1,660	Bioinformatics
	Low K-mer coverage from a SPAdes assembly berthenet	02-05-2018 12:59 AM by berthenet	2	6,218	De novo discovery
	No coverage or very low coverage in the Complete Genomics data raman91	01-10-2018 11:42 PM by raman91	5	2,172	Bioinformatics
	Algebraic operations with genomic occupancy data __sequence	11-25-2017 04:20 AM by __sequence	2	2,276	Bioinformatics
	Minimum sequencing (and coverage) requirement for human ATAC-seq libraries? lobbytruckers	09-01-2017 05:56 AM by vadoue	1	4,684	Sample Prep / Library Generation
	Optimal coverage for sequencing microsatellites with Illumina tugecko	07-20-2017 12:13 PM by SNPsaurus	1	1,753	Illumina/Solexa
	Minimum (ir maximum) bam depth/coverage for structural variation analyses linudz	07-05-2017 06:44 AM by linudz	0	1,794	Bioinformatics
	Amplicon Sequencing & Reads Per Sample (Coverage) cement_head	05-05-2017 07:38 AM by cement_head	6	3,441	Illumina/Solexa
	Making a coverage track of ZNF778 RobbenStijn	02-21-2017 03:39 AM by RobbenStijn	6	2,592	Bioinformatics
	Uneven coverage across scaffold naleph	02-10-2017 07:22 AM by HESmith	7	2,888	Pacific Biosciences
	Metagenomic survey of gut microbiota - depth, tradeoff and num. of samples to include vaxherra	02-06-2017 04:05 PM by vaxherra	0	3,076	Metagenomics
	BED to RefSeq gene format gmarco	01-26-2017 07:17 AM by Ronic	3	4,613	Bioinformatics
	Coverage Estimates from Masked/Unmasked Genome Magpie101	11-04-2016 01:14 PM by dpryan	2	2,037	Bioinformatics
	High percentage of Off-target reads finswimmer	10-20-2016 10:12 PM by finswimmer	2	2,898	Illumina/Solexa
	Read depth differs between bcftools and bam-readcount gwilymh	10-11-2016 02:12 PM by gwilymh	0	2,406	Bioinformatics
	Low coverage after alignment Rangika	09-28-2016 08:57 PM by Rangika	0	2,044	Bioinformatics
	Minimum contig coverage to keep sebl	09-10-2016 11:36 PM by Brian Bushnell	3	8,111	De novo discovery
	Pooling across lanes and depth darthsequencer	05-07-2016 10:52 AM by LOH	2	2,359	Illumina/Solexa
	Difference between sequence coverage and physical coverage sircamp	01-15-2016 04:34 AM by dpryan	1	4,146	Bioinformatics
	Sequence Coverage and Genome Insertion lenght from SAM sircamp	01-14-2016 04:20 AM by GenoMax	1	2,472	Bioinformatics
	Using BBMap to determine possible repeat scaffolds/contigs antifolate	01-06-2016 11:14 PM by antifolate	10	4,754	Bioinformatics

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