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Threads Tagged with mapping
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	STAR: ultrafast universal RNA-seq aligner ( 1 2 3 ... Last Page) alexdobin	06-28-2017 10:56 AM by SamCurt	217	105,851	Bioinformatics
	Variable Bismark mapping efficiency of targetted BS data for DNA methylation dross11	05-26-2017 05:15 AM by fkrueger	10	490	Bioinformatics
	Why mapping rate is low after adapter trimming paired-end data? foolishbrat	02-11-2017 09:26 AM by Brian Bushnell	4	651	Bioinformatics
	Difficulty getting annotation for some UniRef100 IDs jorvis	02-05-2017 09:06 PM by jorvis	0	437	Bioinformatics
	Sam file from alignment of Solid Colorspace reads using Bowtie Alexis1	02-01-2017 04:51 AM by Alexis1	2	662	Bioinformatics
	Mapping possition in SAM format leontovyc_roman	11-21-2016 07:39 AM by leontovyc_roman	2	774	Bioinformatics
	Bowtie2 Error confused1	10-26-2016 07:15 AM by confused1	0	478	Bioinformatics
	Quality trimming & filtering illumina reads Rangika	09-09-2016 06:30 PM by Rangika	2	975	Bioinformatics
	ATAC-seq quality control Kath	09-07-2016 12:48 PM by atpoint	1	1,831	Bioinformatics
	Circular contig in multicontig reference remapping (SMRTPipe, BLASR) Gestahl	08-30-2016 07:10 AM by rhall	1	678	Pacific Biosciences
	Bowtie2 paired end --un-conc tesa	08-18-2016 12:38 AM by tesa	0	950	Epigenetics
	bowtie2 bit 2 of the flag KamilSJaron	07-19-2016 12:44 AM by KamilSJaron	6	857	Bioinformatics
	BWA gives no alignment lines in SAM file jmwhitha	06-05-2016 02:06 PM by jaredroach	17	7,213	Bioinformatics
	BWA mem on interlaced fastq mstagliamonte	04-13-2016 08:52 AM by mstagliamonte	2	890	Bioinformatics
	Mapping assembled genome back to reads: why SNPs? bio_informatics	04-04-2016 08:35 AM by bio_informatics	0	526	Bioinformatics
	remove scaffold and other unplaced sequence before mapping? yong peng	03-27-2016 07:28 PM by yong peng	0	704	Bioinformatics
	Hisat2 vs. bowtie2 - why does bowtie2 mapped better? frymor	03-10-2016 11:34 PM by frymor	2	1,423	Bioinformatics
	Low mapping rate of TSS-data (5'-seq) JonB	02-15-2016 04:09 AM by Michael.Ante	3	869	RNA Sequencing
	mpileup core dumped error with input fasta aligned bamfile. vaibhavvsk	02-10-2016 07:27 PM by vaibhavvsk	0	546	Bioinformatics
	Separating a .sam or .bam file that is based on alignment to multiple sequences sequence_hard	02-09-2016 06:05 AM by WhatsOEver	7	603	Bioinformatics
	A multi-split mapping algorithm for circular RNA, splicing, trans-splicing, and ... ( 1 2) ecSeq Bioinformatics	01-04-2016 12:05 AM by ninni	26	5,662	Bioinformatics
	Mixing paired-end and single-end reads in Tophat: Do I have to reverse the SE-reads f JonB	12-11-2015 01:08 AM by SylvainL	5	1,269	Bioinformatics
	Mapping paired-end reads, include also the SE-reads after trimming? JonB	12-10-2015 02:03 AM by JonB	2	984	Bioinformatics
	GMAP problems: stopping at "Finished checking compiler assumptions" JonB	12-07-2015 11:05 PM by JonB	2	966	Bioinformatics
	Looking for informations about clipOverlap (BamUtil) MLiorz	12-03-2015 05:35 AM by MLiorz	0	555	Illumina/Solexa
	Question: Looking for a genome /draft genome aligner with the these features antifolate	11-24-2015 08:17 AM by antifolate	0	781	Bioinformatics
	different read lengths in rna-star frymor	08-16-2015 11:07 PM by frymor	0	559	Bioinformatics
	Mapping SNPs to Chromosomes satishg	07-31-2015 10:35 AM by satishg	1	595	Bioinformatics
	Hello from QIAGEN Aarhus (Denmark) martin.simonsen	05-27-2015 10:08 PM by martin.simonsen	0	716	Introductions
	Tophat2 with GFF3 annotation fails to produce Bowtie index. seeker	05-19-2015 07:17 AM by rodrigo.duarte88	11	7,316	Bioinformatics

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