SEQanswers - Threads Tagged with alignment

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Threads Tagged with alignment

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Threads Tagged with alignment
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Surprising Alignment drr719	03-23-2022 06:07 AM by drr719	0	580	Bioinformatics
	Seeking workflow for phage-display library sequence results genec	02-10-2022 04:39 PM by genec	0	773	Bioinformatics
	Combining fastq files from paired-end WES prior to trimming and alignment reliscu	05-08-2021 01:59 PM by floem7	3	2,092	Bioinformatics
	Sequencing Human/Mouse ATAC libraries together? ETBA	08-03-2020 03:47 PM by ETBA	4	2,561	Sample Prep / Library Generation
	Wrong blast results boldretriever	03-04-2020 05:59 AM by boldretriever	0	1,632	Bioinformatics
	Wrong bwa alignment? radood	10-30-2019 01:37 PM by radood	3	3,521	Bioinformatics
	Aligning only unique reads in Bowtie gzentner	07-07-2019 07:07 AM by brojee	6	8,030	Bioinformatics
	Difficulty aligning to reference with AVA cog	07-07-2019 06:16 AM by brojee	8	10,700	Bioinformatics
	Is it possible to print DNA sequences of subject organism in tblastn? dineshkumarsrk	04-05-2019 11:50 PM by dineshkumarsrk	0	2,317	Bioinformatics
	New to bioinformatics - Read Alignment/Mapping hiatus	11-28-2018 06:20 AM by hiatus	6	2,900	Bioinformatics
	featureCounts output to DESeq2? lucyf	10-11-2018 03:48 AM by lucyf	0	3,768	Bioinformatics
	Tool for grouping sequences into clusters with homology within each above threshold prishlyK	10-09-2018 02:12 AM by prishlyK	2	3,444	Bioinformatics
	HTSeq-count returns all 0's? lucyf	10-08-2018 12:50 AM by lucyf	0	2,662	Bioinformatics
	Bismark - A New Tool for Mapping and Analysis of Bisulfite-Seq Data ( 1 2 3 ... Last Page) fkrueger	10-05-2018 01:43 AM by akramdi	648	214,870	Bioinformatics
	Bowtie 2 explanation of the pair-end mode report wariobrega	07-18-2018 10:57 PM by gopal_botany	12	35,153	Bioinformatics
	cufflinks: input alignment from hisat2 dovah	05-09-2018 01:09 AM by sahusarika	5	8,119	RNA Sequencing
	STAR: ultrafast universal RNA-seq aligner ( 1 2 3 ... Last Page) alexdobin	04-02-2018 05:59 PM by drdna	218	166,127	Bioinformatics
	Remapping reads ekageyama	02-07-2018 09:29 PM by Dario1984	4	3,113	Bioinformatics
	RNA-Seq Data Analysis Workshop in Berlin, Germany ecSeq Bioinformatics	02-05-2018 04:24 AM by ecSeq Bioinformatics	2	4,372	Bioinformatics
	Alternative to CLC Genomics Workbench viewer k-gun12	02-03-2018 11:57 AM by gringer	4	9,473	Bioinformatics
	Could not locate a bowtie index corresponding to basename -- tried posted solutions ng1812	01-17-2018 08:28 PM by ng1812	0	3,989	Bioinformatics
	Optimal balance of threads for alignment & sorting? afkoeppel	11-27-2017 11:36 AM by afkoeppel	0	2,595	Bioinformatics
	Hisat2 vs Tophat2 variation between tech reps kuristy	10-04-2017 01:23 PM by kuristy	1	3,245	Bioinformatics
	Arioc: GPU-accelerated short-read alignment for BS-seq data RWilton	08-13-2017 07:17 PM by RWilton	0	2,562	Bioinformatics
	How to align multiple genomic regions simultaneously liaoyunshi	08-07-2017 03:28 AM by GenoMax	1	2,432	Bioinformatics
	HISAT2: advantages of build index using annotated transcripts dekontrol	06-22-2017 10:41 PM by dekontrol	0	4,158	Bioinformatics
	Can't find show-aligns in mummer cr517	06-07-2017 02:33 AM by cr517	0	2,592	Bioinformatics
	extended cigar in bwa-mem dovah	06-02-2017 04:27 AM by sklages	7	5,673	Bioinformatics
	RNA-seq alignment on novel region icanwinwyz	04-19-2017 10:58 AM by icanwinwyz	0	2,776	Bioinformatics
	Quality trimming prior to aligning gstone	03-02-2017 09:09 AM by Brian Bushnell	5	6,230	Bioinformatics

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