SEQanswers - Threads Tagged with coverage

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Threads Tagged with coverage

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Threads Tagged with coverage
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Size of human transcriptome/exome for coverage calculation apratap	03-30-2020 05:32 AM by AanaNahum	16	43,980	General
	How many reads/replicates do I need for bacterial RNA-seq? MiSeq? turnersd	02-14-2020 12:29 PM by dmking	4	12,114	Bioinformatics
	Subsample regions of too high coverage sbrohee	01-27-2020 02:13 AM by nazen	2	3,916	Bioinformatics
	Pooling libs. for Novaseq. How many reads/coverage? KB*	05-06-2019 05:35 PM by KB*	0	2,600	Illumina/Solexa
	Low Exome Coverage with Truseq DNA Exome and NextSeq 500 workflow? mhmtgenc	12-17-2018 11:03 PM by nucacidhunter	3	2,978	Illumina/Solexa
	Normalization from different NGS runs genferreri	09-26-2018 05:33 AM by genferreri	2	5,034	Introductions
	How to get a report like stuff of a bam file how many percent of the exons are cover mhmtgenc	08-11-2018 05:48 PM by anoopkmr	4	4,231	Bioinformatics
	Protein annotation parameters (query or subject coverage?) pedro.cabs	07-26-2018 03:17 PM by pedro.cabs	0	2,821	Bioinformatics
	BBMap pileup questions rmf	06-06-2018 04:28 AM by silask	3	4,222	Bioinformatics
	velvetg coverage parameter laura123	04-16-2018 04:32 AM by laura123	0	2,511	Bioinformatics
	Low K-mer coverage from a SPAdes assembly berthenet	02-04-2018 11:59 PM by berthenet	2	9,670	De novo discovery
	No coverage or very low coverage in the Complete Genomics data raman91	01-10-2018 10:42 PM by raman91	5	3,031	Bioinformatics
	Algebraic operations with genomic occupancy data __sequence	11-25-2017 03:20 AM by __sequence	2	3,232	Bioinformatics
	Minimum sequencing (and coverage) requirement for human ATAC-seq libraries? lobbytruckers	09-01-2017 04:56 AM by vadoue	1	5,731	Sample Prep / Library Generation
	Optimal coverage for sequencing microsatellites with Illumina tugecko	07-20-2017 11:13 AM by SNPsaurus	1	2,455	Illumina/Solexa
	Minimum (ir maximum) bam depth/coverage for structural variation analyses linudz	07-05-2017 05:44 AM by linudz	0	2,629	Bioinformatics
	Amplicon Sequencing & Reads Per Sample (Coverage) cement_head	05-05-2017 06:38 AM by cement_head	6	4,494	Illumina/Solexa
	Making a coverage track of ZNF778 RobbenStijn	02-21-2017 02:39 AM by RobbenStijn	6	3,563	Bioinformatics
	Uneven coverage across scaffold naleph	02-10-2017 06:22 AM by HESmith	7	3,775	Pacific Biosciences
	Metagenomic survey of gut microbiota - depth, tradeoff and num. of samples to include vaxherra	02-06-2017 03:05 PM by vaxherra	0	3,910	Metagenomics
	BED to RefSeq gene format gmarco	01-26-2017 06:17 AM by Ronic	3	5,645	Bioinformatics
	Coverage Estimates from Masked/Unmasked Genome Magpie101	11-04-2016 12:14 PM by dpryan	2	2,862	Bioinformatics
	High percentage of Off-target reads finswimmer	10-20-2016 09:12 PM by finswimmer	2	3,742	Illumina/Solexa
	Read depth differs between bcftools and bam-readcount gwilymh	10-11-2016 01:12 PM by gwilymh	0	3,244	Bioinformatics
	Low coverage after alignment Rangika	09-28-2016 07:57 PM by Rangika	0	2,774	Bioinformatics
	Minimum contig coverage to keep sebl	09-10-2016 10:36 PM by Brian Bushnell	3	9,789	De novo discovery
	Pooling across lanes and depth darthsequencer	05-07-2016 09:52 AM by LOH	2	3,182	Illumina/Solexa
	Difference between sequence coverage and physical coverage sircamp	01-15-2016 03:34 AM by dpryan	1	5,428	Bioinformatics
	Sequence Coverage and Genome Insertion lenght from SAM sircamp	01-14-2016 03:20 AM by GenoMax	1	3,306	Bioinformatics
	Using BBMap to determine possible repeat scaffolds/contigs antifolate	01-06-2016 10:14 PM by antifolate	10	6,072	Bioinformatics

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