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Threads Tagged with differential expression

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Threads Tagged with differential expression
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Differential Expression analyses between species Hayden Waller	03-03-2022 09:55 AM by Hayden Waller	0	706	RNA Sequencing
	Last chance to register for online RNA-Seq Workshop June 1-4 najoshi	05-26-2020 09:06 PM by najoshi	0	2,144	Bioinformatics
	DESeq2 interaction term results differ between full dataset & subset cjag	05-15-2020 04:11 PM by cjag	0	2,104	Bioinformatics
	best bioinformatic methods for identification of miRNAs for differential expression lcabus	03-16-2020 08:12 AM by lcabus	0	1,634	Bioinformatics
	Account for confounding factor with big effect - experimental design AndreaWall	03-14-2019 04:36 AM by AndreaWall	0	2,021	Bioinformatics
	Can I test for differential expression using FPKM values? JonB	03-05-2018 02:11 AM by atulchandra	7	9,265	Bioinformatics
	long noncoding RNA DE analysis frymor	02-10-2018 08:48 AM by frymor	0	2,086	Bioinformatics
	How can I specify DEseq2 to only perform comparisons on which I am interested with ? oliver.sacks	01-11-2018 12:51 PM by sdriscoll	1	3,671	RNA Sequencing
	DEIVA: a web application for interactive visual analysis of differential gene express anton.kratz	11-03-2017 04:51 PM by anton.kratz	7	6,377	Bioinformatics
	RNA-seq datasets with multiple factors siazd	08-22-2017 05:27 AM by SeqAn30	1	2,401	Bioinformatics
	How did the edgeR authors compute Figure 2 (genewise deviance statistics?) gabe_rosser	03-28-2017 08:20 AM by gabe_rosser	0	2,391	Bioinformatics
	edgeR:prior.df value Linas	03-15-2017 01:41 AM by Linas	0	2,379	Bioinformatics
	Recommended pipeline for differential miRNA-seq AlexClop	03-08-2017 10:22 PM by sbarberan	1	3,722	Bioinformatics
	DESeq2: outlier detection problem gstone	01-24-2017 11:05 AM by gstone	2	3,526	Bioinformatics
	$differential expression, down-regulation, fraction of genes, rna-seq, up-regulation$ fraction of genes up- and down- regulated velu	01-17-2017 08:41 PM by velu	0	2,229	RNA Sequencing
	How to identify differentially expressed genes within a single sample group? BhariD	12-01-2016 03:18 AM by wdecoster	3	2,883	Bioinformatics
	DESeq2 fold change does not match normalized counts data mrandel	10-29-2016 10:52 AM by dpryan	1	4,291	Bioinformatics
	Limma multifactor experiment design matrix Lugalbanda	10-19-2016 12:12 AM by dpryan	3	3,481	Bioinformatics
	RNA-Seq on clonal pools anlun	10-07-2016 06:38 AM by anlun	0	2,189	RNA Sequencing
	Help with genes.gct file on IGV mavadhani	10-05-2016 09:24 AM by mavadhani	0	2,378	RNA Sequencing
	Is Fold Change reliable? Does anyone use Characteristic Direction? hubertofliege	07-19-2016 11:30 PM by dariober	2	2,790	Bioinformatics
	Differential Expression "categorisation" BeKl	04-20-2016 11:27 AM by marRoma	11	3,860	Bioinformatics
	Differential expression of small subset of genes from RNASeq dataset Tryptamine	03-09-2016 09:17 AM by Tryptamine	0	3,221	RNA Sequencing
	Looking for advice on generating a transcriptome from mapped .bam or .sam files ovon	02-21-2016 10:18 PM by ovon	2	3,147	Bioinformatics
	Differential expression analysis using DESeq for TCGA data alrossi	02-02-2016 07:46 AM by alrossi	0	3,538	Bioinformatics
	Differential expression gene list from TCGA level 3 RNASeq V2 datasets downloaded fro Zeenia Jagga	01-28-2016 12:51 AM by Zeenia Jagga	0	3,660	Bioinformatics
	Motif enrichment in MEME - CentriMo cdias	12-24-2015 01:18 PM by epigenereg	1	3,780	Epigenetics
	differential expression analysis in non-model species - best practice? evt8	12-08-2015 11:22 PM by gringer	2	3,743	RNA Sequencing
	Bacterial RNA-Seq Differential Gene Expression Biological Reps vs Exp Conditions beki.renberg	11-24-2015 09:32 AM by beki.renberg	7	3,915	RNA Sequencing
	differential expression (DE) anj_1	11-18-2015 06:13 PM by anj_1	4	2,677	RNA Sequencing

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