SEQanswers - Threads Tagged with reads

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Threads Tagged with reads

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Threads Tagged with reads
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Is a compositional bias in Sequence Content of initial bases in WES reads normal? geeneticode	08-10-2020 11:18 AM by geeneticode	2	1,345	Bioinformatics
	Question: Not-Merged Reads What to do? lasantos	06-18-2019 01:50 AM by lasantos	0	1,323	Bioinformatics
	Pooling libs. for Novaseq. How many reads/coverage? KB*	05-06-2019 06:35 PM by KB*	0	1,761	Illumina/Solexa
	Working with BAM files deKoch13	03-11-2019 07:37 AM by GenoMax	5	2,265	General
	Assembly problem sehrish	02-28-2019 06:42 AM by Hannes22	2	3,114	Introductions
	Duplicate read names - BWA mem - paired reads have different names spabinger	05-25-2018 05:27 AM by danieleyumi	6	5,385	Bioinformatics
	amount of reads wylde3161	01-03-2017 06:19 AM by avierstr	4	2,625	RNA Sequencing
	Compare avg fragment length of major/minor allele reads at heterozygous position TristanB	04-09-2016 12:27 PM by TristanB	0	1,596	General
	All ChIP Seq Reads failing to Align to reference genome ( 1 2) fh331	04-07-2016 01:30 AM by SylvainL	20	11,977	Bioinformatics
	NextSeq reads count PJohn	01-19-2016 10:28 AM by GenoMax	1	2,445	Illumina/Solexa
	Tophat mapping problem on reads with length=50nt(or 51nt) tinkering	11-06-2015 07:23 PM by GenoMax	3	2,726	RNA Sequencing
	How can i get the number of read aligned to one scaffold youngjune29bhak	08-04-2015 12:13 AM by youngjune29bhak	0	1,518	Bioinformatics
	Reads do not align with reference genome chavesbio	06-30-2015 10:31 AM by GenoMax	3	2,499	Ion Torrent
	Understanding 16s RNA reads bio_informatics	05-15-2015 11:29 AM by bio_informatics	0	2,180	Metagenomics
	determining number of reads in a contig using clc genomics work bench kaps	04-22-2015 03:01 AM by kaps	2	1,637	General
	Basic question mapping read/contigs (Bowtie2) Alun3.1	04-10-2015 11:48 PM by Alun3.1	2	2,662	Bioinformatics
	What does IGV track color alignments by strand when using non-stranded RNA-seq? Villy	03-20-2015 12:49 AM by sarvidsson	3	3,409	Bioinformatics
	Getting the part of a genome that was NOT covered by a samples reads naymikm	10-28-2014 09:36 PM by naymikm	4	2,182	Bioinformatics
	Interpretation of bwa output - has it used all the reads gwilymh	10-16-2014 09:38 AM by gwilymh	0	2,201	Bioinformatics
	Count reads around breakpoint (rna-seq) spoonman	07-29-2014 07:09 AM by spoonman	0	1,913	Bioinformatics
	Question about .profile file bonifera	07-17-2014 11:12 AM by bonifera	0	1,559	Bioinformatics
	How to use samtools idxstats <bamfile> serhatg	07-02-2014 11:28 PM by serhatg	2	2,768	Bioinformatics
	overrepresented reads with a given length ebe	07-02-2014 01:52 AM by ebe	0	1,927	454 Pyrosequencing
	Illumina MiSeq read orientiation Puhekupla	06-19-2014 04:08 AM by bernardo_bello	4	3,377	Bioinformatics
	Separating aligned reads thh32	03-21-2014 09:57 AM by Brian Bushnell	6	2,843	Bioinformatics
	Diff expression: pooling reads of replicates/treatments for de-novo assembly CarlosVM	01-10-2014 04:05 AM by Anemone	2	2,998	RNA Sequencing
	First 20bp of MiSeq reads are weird reubennowell	05-23-2013 02:28 PM by nickloman	7	3,676	Bioinformatics
	Query regarding RNA-Seq hit/read count Goomba_man	04-08-2013 10:07 AM by Goomba_man	0	2,114	RNA Sequencing
	CuffDiff: genes with highly abundant reads have FPKM 0. uniportdb	02-16-2013 10:09 PM by uniportdb	3	3,682	Bioinformatics
	Reads within introns from polyA+ samples shambam	11-16-2012 06:09 AM by shambam	5	2,314	RNA Sequencing

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