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alignment amplicon sequencing assembly atac-seq automation bam bbmap bedtools bioanalyzer bioinformactics bioinformatics blast bowtie bowtie2 cancer chip-seq chip seq coverage data analysis ddrad deseq2 epigenetics error fastqc featurecounts gatk genetics genome genomics gtf illumina index library prep library preparation machine learning mapping metagenomics microarray microbiome miseq nanopore nextera nextera xt next gen sequencing nextseq ngs ngs analysis normalization pacbio postdoc python radseq rna rna-seq rnaseq rna seq rnaseq analysis samtools sequencing single cell single cell rnaseq snp star aligner statistics strand ngs training variant calling vcf velvet workshop

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