SEQanswers - Threads Tagged with normalization

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Threads Tagged with normalization

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Threads Tagged with normalization
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Introducing BBNorm, a read normalization and error-correction tool ( 1 2 3) Brian Bushnell	08-12-2020 01:51 PM by uloeber	53	44,209	Bioinformatics
	1/5 Nextera Flex number of cycles mdegraaf	04-30-2020 08:39 AM by Godzilla	1	2,277	Illumina/Solexa
	Combining multiple bams without losing library size information? Mic23	04-30-2020 01:50 AM by Mic23	0	788	Bioinformatics
	Normalization from different NGS runs genferreri	09-26-2018 06:33 AM by genferreri	2	4,091	Introductions
	featureCounts - does it normalize by gene length? bzguy	09-20-2018 05:22 AM by GenoMax	1	2,693	RNA Sequencing
	Normalization in single cell RNA-seq data travelk	06-05-2018 12:55 PM by Bidfudge	15	10,619	Bioinformatics
	some variants disappear after bcftools norm sc_123	04-09-2018 03:25 AM by sc_123	0	2,252	Bioinformatics
	FeatureCounts Normalization akinemma	03-11-2018 09:30 AM by akinemma	0	2,839	Bioinformatics
	ONCOCNV: a method to extract CNAs from amplicon (or targeted) sequencing data valeu	02-24-2018 02:03 AM by aron_iral	13	8,000	Bioinformatics
	how to normalize reads in metatranscriptomes? pedrorodrigues	01-30-2018 10:33 AM by pedrorodrigues	0	1,464	Bioinformatics
	Question about library normalization methods wimverv	05-01-2017 02:22 PM by KimUTA	6	6,083	Sample Prep / Library Generation
	Normalize small RNA data with spike-in controls? jazz	04-28-2017 04:19 AM by krespim	4	4,296	Bioinformatics
	Spike-in sets for small RNA seq? mRNA123	04-28-2017 04:14 AM by krespim	3	3,756	Sample Prep / Library Generation
	2 treatments and 1 control, a three way normalization for cufflink output vrutantshah	10-06-2016 02:44 PM by vrutantshah	0	2,310	Bioinformatics
	comparision with Published RNA-seq priya	10-06-2016 07:36 AM by priya	0	1,798	Bioinformatics
	TPM and FPLM problem? Ahmadiut	06-24-2016 01:10 AM by Ahmadiut	0	2,090	RNA Sequencing
	SequalPrep normalization plates and low amount of starting material meri.lindqvist	03-15-2016 06:19 AM by meri.lindqvist	0	2,532	Sample Prep / Library Generation
	Up to date ERCC spike ins RNA seq analysis Alex852013	02-25-2016 01:40 AM by SylvainL	10	5,096	Bioinformatics
	DESeq2 q normalization RNA-seq and small RNA-seq RikyJKD	02-20-2016 10:42 AM by blancha	3	2,676	Bioinformatics
	Alternatives to SequalPrep acockburn	11-17-2015 06:56 AM by acockburn	0	2,183	Sample Prep / Library Generation
	miseq run troubleshoot and advice on nextera xt library normalization sebl	08-20-2015 08:46 AM by soleulloa	5	6,094	Illumina/Solexa
	edgeR, "DGELIst" function, "group" parameter David [R]	07-23-2015 05:29 AM by David [R]	4	3,369	RNA Sequencing
	Normalization by the library size during variant detection NikTuzov	07-17-2015 07:24 AM by NikTuzov	2	2,532	Bioinformatics
	RNAseq normalize DE by edgeR with transfection positive control gene jsage8	06-08-2015 11:25 AM by jsage8	0	2,620	Bioinformatics
	Normalization and analysis of proteomic spectral count data bjackson	05-08-2015 10:37 AM by bjackson	0	2,520	Bioinformatics
	RNA-seq normalization Golsheed	03-23-2015 05:22 AM by bastianwur	5	3,544	Bioinformatics
	Treatment of ChIP-Seq Input jazz710	12-15-2014 10:43 AM by jazz710	0	2,316	Bioinformatics
	RNA-seq normalization in samples with different cell densities rpeiro	12-04-2014 10:07 AM by jparsons	3	2,367	RNA Sequencing
	Question for experts in normalization Dampor	11-26-2014 12:30 AM by dpryan	1	2,067	Bioinformatics
	DESeq Normalization Question turnersd	11-25-2014 11:19 PM by bpb9	5	5,339	Bioinformatics

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