SEQanswers - Threads Tagged with pindel

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Threads Tagged with pindel

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Threads Tagged with pindel
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	How to get variant allele frequency for internal tandem duplications from Pindel? myourshaw	01-30-2020 09:29 AM by myourshaw	0	554	Bioinformatics
	optimize a execution of a pindel process cmccabe	01-11-2020 04:52 AM by cmccabe	0	841	Bioinformatics
	Issues installing Pindel from git JSThompson	11-03-2017 10:38 AM by JSThompson	1	921	Bioinformatics
	Pindel and GATK AD Concordance JSThompson	06-08-2017 05:34 AM by JSThompson	1	1,999	Bioinformatics
	Pindel configuration file errors cmonat	03-22-2017 07:54 AM by cmonat	0	1,971	Bioinformatics
	Pindel "per sample" columns RGP	11-15-2016 08:43 AM by RGP	0	1,057	Bioinformatics
	Pindel: improved version for indels and structural variants ( 1 2 3 ... Last Page) KaiYe	07-17-2016 08:14 PM by Yongyong.Ren	147	58,923	Bioinformatics
	Pindel considers reads or fragments? anjulka	05-17-2016 01:11 PM by anjulka	0	785	Bioinformatics
	Pindel optimisation for exome data smartBugs	03-16-2015 01:21 AM by smartBugs	1	1,612	Bioinformatics
	Problem with Pindel output vd4mindia	03-09-2015 04:34 AM by vd4mindia	0	1,432	Bioinformatics
	Pindel memory usage 30x whole genome Nick	02-12-2015 07:40 AM by KaiYe	3	1,818	Bioinformatics
	Creating psuedo paired-end sequencing reads from single-end reads cburke04	01-14-2015 07:10 PM by dcameron	6	2,414	Bioinformatics
	Problem for pindel2vcf to create vcf from from pindel-created _D files hbl_ca	11-27-2014 11:51 AM by hbl_ca	0	1,725	Bioinformatics
	Pindel Algorithm Explanation Jeromek	08-12-2014 08:53 AM by Jeromek	7	2,508	Bioinformatics
	Pindel: Reference counting (Short Insertion) renatopuga	08-05-2014 10:29 AM by renatopuga	1	1,583	Bioinformatics
	How to run pindel with multithreading? nasreddin	07-25-2014 07:57 AM by nasreddin	3	2,479	Bioinformatics
	Interpreting Pindel output bwubb	07-07-2014 06:47 AM by KaiYe	11	8,815	Bioinformatics
	bwa mem and pindel Ivarela	06-25-2014 10:21 AM by Ivarela	0	2,081	Genomic Resequencing
	BWA MEM and PINDEL Ivarela	06-20-2014 09:24 AM by Ivarela	0	2,059	Bioinformatics
	Filter somatic calls in Pindel output persorrels	04-29-2014 08:23 AM by KaiYe	1	2,519	Bioinformatics
	Interpreting Pindel _INT output format Jonathan Ellis	04-25-2014 01:39 PM by KaiYe	1	1,810	Bioinformatics
	Pindel Question regarding long variants Topulaneus-Hattum	02-27-2014 07:57 AM by Topulaneus-Hattum	0	1,319	Bioinformatics
	Pindel output Row 32+ per sample details millerrruth	02-24-2014 02:52 PM by KaiYe	3	1,930	Bioinformatics
	Can Pindel applied to SOLiD data? slowsmile	01-01-2014 08:26 PM by slowsmile	2	7,872	SOLiD
	Extracting readnames from pindel robinweide	11-27-2013 04:25 AM by robinweide	2	1,910	Bioinformatics
	Pindel- empty output? Seq_student	08-15-2013 01:30 PM by KaiYe	12	5,184	Bioinformatics
	Quantifying allele fraction of small to medium deletions in amplication sequencing brentonmar	08-08-2013 06:56 AM by chrisamiller	1	2,185	Bioinformatics
	Significance of Pindel's "AD" and finding SVs in IGV opulcy97	07-26-2013 11:12 AM by KaiYe	8	3,702	Bioinformatics
	Error: Running pindel on breakdancer output opulcy97	07-25-2013 05:45 AM by opulcy97	2	2,069	Bioinformatics
	Pindel multi sample run opulcy97	07-18-2013 01:52 AM by opulcy97	2	1,989	Bioinformatics

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