SEQanswers - Threads Tagged with splicing

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Threads Tagged with splicing

Threads Tagged with splicing
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	HISAT2 not reporting all splice sites? mattdoug	04-28-2017 01:53 PM by mattdoug	0	2,146	Bioinformatics
	SplicingCompass: error in processing CoverageBed files big_picture	04-21-2017 01:52 AM by big_picture	0	1,071	Bioinformatics
	Junctions.bed file in hisat2? badribioinfo	03-12-2017 10:47 AM by badribioinfo	1	8,435	The Pipeline
	MISO annotations rlv	02-02-2017 12:18 PM by rlv	0	1,418	Bioinformatics
	MISO: Best-guessing insert size and stddev versus running single-ended for PE data fpbarthel	08-24-2016 03:10 PM by Brian Bushnell	3	1,978	Bioinformatics
	spliceR: problems in detecting NMD sensitivity from RNA-seq data znasim09	08-23-2016 06:45 PM by znasim09	0	1,933	RNA Sequencing
	NOTEST everywhere with cuffdiff ramiro2k	07-20-2016 08:09 AM by ramiro2k	3	3,129	Bioinformatics
	SpliceR- Splice Graphs and Alternative Splicing mfahim	06-28-2015 06:13 PM by mfahim	0	1,010	RNA Sequencing
	My Sanger sequencing results do not fit to RNA seq Anke	06-18-2015 01:59 AM by Anke	0	1,761	General
	Alternative splicing versus incomplete splicing? cfourps	08-05-2014 02:13 AM by dpryan	1	1,622	General
	Splicing using cuffdiff R.Vin	08-01-2014 02:16 AM by R.Vin	0	1,645	RNA Sequencing
	Validation of Splicing Results from cufflinks-cuffdiff pipeline pm2012	05-02-2014 03:38 PM by pm2012	0	1,843	RNA Sequencing
	Quantify ration of spliced to unspliced reads wespiser	04-09-2014 03:19 PM by dpryan	1	1,460	RNA Sequencing
	Extracting statistically significant differentially expressed exons from DEXseq resu pm2012	04-01-2014 03:06 AM by amandinette	2	2,553	RNA Sequencing
	Gene Ids & description in DEXSeq html report pm2012	03-20-2014 10:27 AM by pm2012	2	2,598	RNA Sequencing
	SplicingCompass errors: argument is of length zero pengchy	10-01-2013 11:15 AM by Maayanster	6	3,277	Bioinformatics
	Predicting Cryptic Splice Sites? Rocketknight	06-20-2013 08:41 AM by Rocketknight	0	1,908	Bioinformatics
	splicing.dff from Cuffdiff gaolongnuaa	05-28-2013 07:53 AM by gaolongnuaa	0	1,471	Bioinformatics
	Generating Splicing Graph genomeHunter	04-05-2013 11:53 AM by genomeHunter	0	1,060	RNA Sequencing
	Tophat and/or Cufflinks: strict splice donor/acceptor requirements? griffon42	03-26-2013 02:54 PM by griffon42	0	1,364	RNA Sequencing
	AAT (analysis and annotation of genomes) - error Daniel Fernandez	02-15-2012 09:16 AM by Daniel Fernandez	1	2,028	Bioinformatics
	RNA-seq library prep without poly-A selection turnersd	02-01-2012 09:48 AM by mediator	5	4,216	Bioinformatics
	cufflinks, tophat, and mysterious snoRNAs JueFish	08-24-2011 09:52 AM by JueFish	0	1,518	Bioinformatics
	Cufflinks pipeline for splicing differences between animal samples seqhorn	07-08-2011 02:23 AM by seqhorn	0	2,096	Bioinformatics
	RNA-Seq biology alperyilmaz	05-05-2010 11:00 AM by alperyilmaz	0	2,042	RNA Sequencing
	SpliceMap: New tool for detecting splice junctions from RNA-Seq data jm1234567890	04-22-2010 08:57 AM by jm1234567890	10	8,127	Bioinformatics
	Tophat: Is accepted_hits.sam normalized? jling	11-03-2009 05:22 PM by jling	2	2,213	Bioinformatics

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