SEQanswers - Threads Tagged with bbmap

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Threads Tagged with bbmap

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Threads Tagged with bbmap
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	BBMap (aligner for DNA/RNAseq) is now open-source and available for download. ( 1 2 3 ... Last Page) Brian Bushnell	Today 06:08 AM by StephCarr	639	126,445	Bioinformatics
	Introducing BBMerge: A paired-end read merger ( 1 2 3 ... Last Page) Brian Bushnell	07-09-2018 02:26 AM by GenoMax	125	44,702	Bioinformatics
	Introducing Tadpole: an assembler, error-corrector, and read-extender ( 1 2 3 ... Last Page) Brian Bushnell	07-07-2018 11:46 AM by kokyriakidis	94	19,544	Bioinformatics
	Error encountered when running kmercountexact.sh from bbmap lfaller	06-11-2018 03:59 PM by neavemj	1	367	Bioinformatics
	BBMap pileup questions rmf	06-06-2018 04:28 AM by silask	3	864	Bioinformatics
	Yes .. BBMap can do that! ( 1 2 3 ... Last Page) GenoMax	06-01-2018 12:14 PM by darthsequencer	212	53,922	Bioinformatics
	calctruequality in bbmap Coyk	05-08-2018 12:57 PM by Coyk	0	294	Bioinformatics
	BBSplit result statistics s18692001	04-29-2018 03:54 PM by GenoMax	1	531	Bioinformatics
	bbmap callvariants.sh multisample vcf format, wrong number of fields Greg	04-25-2018 12:00 AM by denisDDS	5	631	Bioinformatics
	MinHash Sketch - A Tool for Rapid Sequence Comparison Brian Bushnell	04-15-2018 10:54 AM by boulund	8	3,065	Bioinformatics
	Introducing Reformat, a fast read format converter ( 1 2) Brian Bushnell	03-20-2018 09:07 AM by Brian Bushnell	22	14,559	Bioinformatics
	BBMAP paired-end alignment problem Mark	03-02-2018 08:30 AM by GenoMax	1	474	Bioinformatics
	problems with BBmap/java sfh838t	02-28-2018 06:11 AM by sfh838t	5	672	Bioinformatics
	Several questions regarding BBMap/BBSplit MSchm	12-18-2017 10:01 AM by mcmc	2	1,618	Bioinformatics
	Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files ( 1 2 3 ... Last Page) Brian Bushnell	12-05-2017 06:56 AM by GenoMax	83	13,575	Bioinformatics
	bbtools: how to properly set up rqcfilter sghignone	11-06-2017 03:24 AM by sghignone	2	592	Bioinformatics
	Java problem when using BBmap Lukas Hellmann	10-23-2017 05:23 AM by Lukas Hellmann	4	642	Bioinformatics
	Introducing FilterByTile: Remove Low-Quality Reads Without Adding Bias Brian Bushnell	10-20-2017 03:56 AM by santiagorevale	16	4,384	Bioinformatics
	Adding barcode indexes back into FASTQ headers? PeatMaster	03-17-2017 10:40 AM by PeatMaster	5	1,854	Bioinformatics
	BBRepair quality score changes gstone	02-28-2017 02:27 PM by GenoMax	5	1,037	Bioinformatics
	PCR amplicons primer design - need advice danova	10-27-2016 07:23 AM by danova	2	928	Bioinformatics
	Dedupe on assembled RNA-Seq? DrYak	04-07-2016 07:05 AM by mastal	2	952	Bioinformatics
	bbmerge ratiomode ? danova	02-16-2016 10:58 AM by danova	2	870	Bioinformatics
	Using BBMap to determine possible repeat scaffolds/contigs antifolate	01-06-2016 10:14 PM by antifolate	10	2,368	Bioinformatics
	Introducing KmerCompressor, a tool for set operations on kmers Brian Bushnell	10-06-2015 10:54 PM by luc	3	2,353	Bioinformatics
	STAR vs tophat2 - mapping reads to long exons frymor	08-18-2015 02:17 PM by Brian Bushnell	7	2,056	Bioinformatics
	bowtie2 local alignment frymor	07-06-2015 09:39 AM by Brian Bushnell	6	2,047	Bioinformatics
	Please help my BBMap cannot remove Illumina adapter TofuKaj	04-28-2015 08:53 AM by Brian Bushnell	4	1,876	Bioinformatics
	Genome size estimation for paired end and mate paired data mandar.bobade60	02-10-2015 10:09 PM by Brian Bushnell	1	1,237	General
	Best methods for merging heterozygous contigs? Nordic	11-20-2014 06:47 AM by Nordic	4	1,816	Bioinformatics

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