SEQanswers - Threads Tagged with bbmap

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Threads Tagged with bbmap

Threads Tagged with bbmap
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	BBMap (aligner for DNA/RNAseq) is now open-source and available for download. ( 1 2 3 ... Last Page) Brian Bushnell	Today 10:41 AM by kbseah	630	117,268	Bioinformatics
	MinHash Sketch - A Tool for Rapid Sequence Comparison Brian Bushnell	04-15-2018 10:54 AM by boulund	8	2,616	Bioinformatics
	Introducing BBMerge: A paired-end read merger ( 1 2 3 ... Last Page) Brian Bushnell	04-13-2018 04:44 AM by chloe1005	118	41,473	Bioinformatics
	bbmap callvariants.sh multisample vcf format, wrong number of fields Greg	04-04-2018 09:27 AM by Greg	2	258	Bioinformatics
	Yes .. BBMap can do that! ( 1 2 3 ... Last Page) GenoMax	03-21-2018 04:59 PM by GenoMax	211	49,013	Bioinformatics
	Introducing Reformat, a fast read format converter ( 1 2) Brian Bushnell	03-20-2018 09:07 AM by Brian Bushnell	22	13,492	Bioinformatics
	BBMAP paired-end alignment problem Mark	03-02-2018 08:30 AM by GenoMax	1	351	Bioinformatics
	problems with BBmap/java sfh838t	02-28-2018 06:11 AM by sfh838t	5	529	Bioinformatics
	Introducing Tadpole: an assembler, error-corrector, and read-extender ( 1 2 3 ... Last Page) Brian Bushnell	02-12-2018 01:45 PM by susanklein	93	17,717	Bioinformatics
	BBMap pileup questions rmf	12-20-2017 10:10 AM by GenoMax	1	472	Bioinformatics
	Several questions regarding BBMap/BBSplit MSchm	12-18-2017 10:01 AM by mcmc	2	1,414	Bioinformatics
	Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files ( 1 2 3 ... Last Page) Brian Bushnell	12-05-2017 06:56 AM by GenoMax	83	12,467	Bioinformatics
	bbtools: how to properly set up rqcfilter sghignone	11-06-2017 03:24 AM by sghignone	2	451	Bioinformatics
	Java problem when using BBmap Lukas Hellmann	10-23-2017 05:23 AM by Lukas Hellmann	4	484	Bioinformatics
	Introducing FilterByTile: Remove Low-Quality Reads Without Adding Bias Brian Bushnell	10-20-2017 03:56 AM by santiagorevale	16	4,070	Bioinformatics
	Adding barcode indexes back into FASTQ headers? PeatMaster	03-17-2017 10:40 AM by PeatMaster	5	1,497	Bioinformatics
	BBRepair quality score changes gstone	02-28-2017 02:27 PM by GenoMax	5	912	Bioinformatics
	PCR amplicons primer design - need advice danova	10-27-2016 07:23 AM by danova	2	828	Bioinformatics
	Dedupe on assembled RNA-Seq? DrYak	04-07-2016 07:05 AM by mastal	2	834	Bioinformatics
	bbmerge ratiomode ? danova	02-16-2016 10:58 AM by danova	2	758	Bioinformatics
	Using BBMap to determine possible repeat scaffolds/contigs antifolate	01-06-2016 10:14 PM by antifolate	10	2,128	Bioinformatics
	Introducing KmerCompressor, a tool for set operations on kmers Brian Bushnell	10-06-2015 10:54 PM by luc	3	2,097	Bioinformatics
	STAR vs tophat2 - mapping reads to long exons frymor	08-18-2015 02:17 PM by Brian Bushnell	7	1,861	Bioinformatics
	bowtie2 local alignment frymor	07-06-2015 09:39 AM by Brian Bushnell	6	1,750	Bioinformatics
	Please help my BBMap cannot remove Illumina adapter TofuKaj	04-28-2015 08:53 AM by Brian Bushnell	4	1,693	Bioinformatics
	Genome size estimation for paired end and mate paired data mandar.bobade60	02-10-2015 10:09 PM by Brian Bushnell	1	1,116	General
	Best methods for merging heterozygous contigs? Nordic	11-20-2014 06:47 AM by Nordic	4	1,665	Bioinformatics
	Introducing BBMap, a new short-read aligner for DNA and RNA ( 1 2) Brian Bushnell	07-07-2014 09:37 AM by Brian Bushnell	24	8,194	Bioinformatics

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