SEQanswers - Threads Tagged with bbmap

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Threads Tagged with bbmap

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Threads Tagged with bbmap
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Yes .. BBMap can do that! ( 1 2 3 ... Last Page) GenoMax	10-16-2018 11:06 PM by SDH	213	58,566	Bioinformatics
	BBMap (aligner for DNA/RNAseq) is now open-source and available for download. ( 1 2 3 ... Last Page) Brian Bushnell	10-11-2018 07:36 AM by csmiller	651	134,513	Bioinformatics
	question about dedupe renameclusters option shandley	09-29-2018 04:02 PM by shandley	0	186	Bioinformatics
	quantifying transcripts in a redundant genome garlic	08-31-2018 06:50 AM by ASintsova	1	602	Bioinformatics
	Introducing Tadpole: an assembler, error-corrector, and read-extender ( 1 2 3 ... Last Page) Brian Bushnell	08-07-2018 01:53 AM by vlokoslak	97	21,721	Bioinformatics
	Introducing BBMerge: A paired-end read merger ( 1 2 3 ... Last Page) Brian Bushnell	08-06-2018 03:16 PM by ilya	126	47,368	Bioinformatics
	Introducing Reformat, a fast read format converter ( 1 2) Brian Bushnell	08-02-2018 05:29 AM by sunnycqcn	25	15,876	Bioinformatics
	Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files ( 1 2 3 ... Last Page) Brian Bushnell	07-23-2018 11:02 AM by kokyriakidis	90	15,442	Bioinformatics
	Error encountered when running kmercountexact.sh from bbmap lfaller	06-11-2018 03:59 PM by neavemj	1	473	Bioinformatics
	BBMap pileup questions rmf	06-06-2018 04:28 AM by silask	3	1,042	Bioinformatics
	calctruequality in bbmap Coyk	05-08-2018 12:57 PM by Coyk	0	394	Bioinformatics
	BBSplit result statistics s18692001	04-29-2018 03:54 PM by GenoMax	1	605	Bioinformatics
	bbmap callvariants.sh multisample vcf format, wrong number of fields Greg	04-25-2018 12:00 AM by denisDDS	5	770	Bioinformatics
	MinHash Sketch - A Tool for Rapid Sequence Comparison Brian Bushnell	04-15-2018 10:54 AM by boulund	8	3,397	Bioinformatics
	BBMAP paired-end alignment problem Mark	03-02-2018 08:30 AM by GenoMax	1	599	Bioinformatics
	problems with BBmap/java sfh838t	02-28-2018 06:11 AM by sfh838t	5	791	Bioinformatics
	Several questions regarding BBMap/BBSplit MSchm	12-18-2017 10:01 AM by mcmc	2	1,739	Bioinformatics
	bbtools: how to properly set up rqcfilter sghignone	11-06-2017 03:24 AM by sghignone	2	735	Bioinformatics
	Java problem when using BBmap Lukas Hellmann	10-23-2017 05:23 AM by Lukas Hellmann	4	745	Bioinformatics
	Introducing FilterByTile: Remove Low-Quality Reads Without Adding Bias Brian Bushnell	10-20-2017 03:56 AM by santiagorevale	16	4,659	Bioinformatics
	Adding barcode indexes back into FASTQ headers? PeatMaster	03-17-2017 10:40 AM by PeatMaster	5	2,112	Bioinformatics
	BBRepair quality score changes gstone	02-28-2017 02:27 PM by GenoMax	5	1,140	Bioinformatics
	PCR amplicons primer design - need advice danova	10-27-2016 07:23 AM by danova	2	1,000	Bioinformatics
	Dedupe on assembled RNA-Seq? DrYak	04-07-2016 07:05 AM by mastal	2	1,064	Bioinformatics
	bbmerge ratiomode ? danova	02-16-2016 10:58 AM by danova	2	948	Bioinformatics
	Using BBMap to determine possible repeat scaffolds/contigs antifolate	01-06-2016 10:14 PM by antifolate	10	2,520	Bioinformatics
	Introducing KmerCompressor, a tool for set operations on kmers Brian Bushnell	10-06-2015 10:54 PM by luc	3	2,592	Bioinformatics
	STAR vs tophat2 - mapping reads to long exons frymor	08-18-2015 02:17 PM by Brian Bushnell	7	2,172	Bioinformatics
	bowtie2 local alignment frymor	07-06-2015 09:39 AM by Brian Bushnell	6	2,295	Bioinformatics
	Please help my BBMap cannot remove Illumina adapter TofuKaj	04-28-2015 08:53 AM by Brian Bushnell	4	2,010	Bioinformatics

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