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Threads Tagged with assembly

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Threads Tagged with assembly
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Anyone had a positive experience with the assembler PERGA? antifolate	12-21-2015 04:50 PM by antifolate	0	1,277	Bioinformatics
	crAss for comparative metagenomics using cross-assembly dutilh	12-08-2015 09:07 AM by dutilh	19	11,739	Bioinformatics
	Fungal Genome Assembly... a painful experience nwfungi	12-04-2015 08:05 AM by nwfungi	7	3,441	Bioinformatics
	Need suggestions to quantify genomic activity antifolate	11-30-2015 09:40 AM by antifolate	2	1,320	Bioinformatics
	Question: Looking for a genome /draft genome aligner with the these features antifolate	11-24-2015 09:17 AM by antifolate	0	1,402	Bioinformatics
	Pulling together contigs: a less stringent assembly nwfungi	11-17-2015 11:37 PM by flxlex	4	1,914	Bioinformatics
	Minimal overlap between two reads in the de Bruijn algorithm TauOvermind	11-17-2015 11:28 AM by TauOvermind	2	1,564	Bioinformatics
	Extracting Unmapped Contigs antifolate	10-27-2015 03:03 PM by GenoMax	10	2,359	Bioinformatics
	De Novo Genome Assembly Using Next-Generation Sequence Data (8 - 10 February 2016) ecSeq Bioinformatics	10-06-2015 03:28 AM by ecSeq Bioinformatics	0	2,164	Bioinformatics
	Mate Pair QC cwisch88	09-30-2015 01:11 PM by cwisch88	1	2,141	Bioinformatics
	Selective assembly of Genome ktayal	09-18-2015 01:53 PM by gringer	3	1,487	Illumina/Solexa
	Failed assembly due to memory limits in pyRAD Coregonus	08-27-2015 06:37 AM by Coregonus	0	5,955	The Pipeline
	How can i get the number of read aligned to one scaffold youngjune29bhak	08-04-2015 12:13 AM by youngjune29bhak	0	979	Bioinformatics
	New MOOC: Algorithms for DNA Sequencing Ben Langmead	08-03-2015 07:47 AM by Ben Langmead	0	1,408	Bioinformatics
	Assembly paired-end sequences with Velvet efsalcedo	07-12-2015 09:10 PM by Brian Bushnell	4	3,141	Illumina/Solexa
	Bioinformatician position rstepanauskas	07-05-2015 01:56 PM by rstepanauskas	0	904	Academic/Non-Profit Jobs
	N50 explained maasha	06-11-2015 09:27 AM by kbradnam	19	134,866	Bioinformatics
	Pair-end sequence data preparation for Trancriptome assembly GillermoPonz	05-28-2015 10:37 AM by GenoMax	3	1,869	Bioinformatics
	Hello from QIAGEN Aarhus (Denmark) martin.simonsen	05-27-2015 11:08 PM by martin.simonsen	0	1,616	Introductions
	SPAdes: erroneous kmer threshold bio_informatics	05-17-2015 06:03 PM by bio_informatics	9	4,891	Bioinformatics
	What is the effect of modulating the gaplenDiff parameter -G in SOAPdenovo2? Some kind of padawan	05-08-2015 09:22 AM by Some kind of padawan	0	1,613	De novo discovery
	SPAdes: selecting K-mer based on read length bio_informatics	04-20-2015 05:32 AM by bio_informatics	8	11,808	Bioinformatics
	How would sequence overrepresentation affect the quality of a De Novo assembly? GillermoPonz	04-15-2015 02:41 AM by GillermoPonz	0	1,531	Bioinformatics
	SPAdes: does contig with node id has/refer coverage? bio_informatics	03-27-2015 06:44 AM by bio_informatics	4	6,050	Bioinformatics
	Direction of assembled genome/output? bio_informatics	03-25-2015 08:10 AM by bio_informatics	10	1,665	Bioinformatics
	Overlap prep job failed Medhat	02-04-2015 02:37 PM by cwisch88	4	3,204	Pacific Biosciences
	Assembled contigs vs short reads vanillasky	02-04-2015 02:05 PM by Brian Bushnell	5	2,379	Bioinformatics
	Avoiding Genome Assembly: Illumina DNA-Seq in-silico Library Subtraction? jazz710	01-29-2015 09:49 AM by jazz710	9	2,631	Bioinformatics
	Genome to assemble- need hardware help! NYGen	01-11-2015 07:36 PM by jpummil	1	1,449	Bioinformatics
	how to create output directory folder on velvet suhalsuhaimi	12-28-2014 05:04 AM by GenoMax	5	3,205	Bioinformatics

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