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» Online Users: 43
5 members and 38 guests
AnthonyB, GKM, ngs, wijerasa
Most users ever online was 245, 06-30-2010 at 06:42 AM.
» Stats
Members: 10,914
Threads: 5,343
Posts: 23,098
Top Poster: nilshomer (649)
Welcome to our newest member, amnataufiq
» New Posts
Title, Username, & Date Last Post Replies Views Forum
What is the best pipeline for RNASeq atm?
foxyg
Today 07:56 PM
by GKM
6 117 Bioinformatics
SRMA Error
dmurdock
Today 06:26 PM
by dmurdock
0 13 Bioinformatics
about dbsnp versions and the best way to filter...
Fabrice ODEFREY
Today 06:18 PM
by Fabrice ODEFREY
2 92 Bioinformatics
Where can I find public dataset of NGS?
xinwu
Today 05:11 PM
by xinwu
2 90 Bioinformatics
Novoalign Alignment Time
Kristen
Today 04:19 PM
by sparks
5 143 Bioinformatics
Tophat command line options
ice
Today 03:25 PM
by GKM
6 123 RNA Sequencing
Cloud Computing for the Life Sciences
Aug 23, 2010 - 12:39 AM - by mza
I'll be hosting an free, 60 minute webinar focusing on cloud computing for life science and pharmaceutical research. I hope you can join us!

When: Wednesday, September 22, 2010 10:00 AM – 11:00 AM GMT
Where: Online webinar
Hosted by: Amazon Web Services
Registration: Free - click here to register

Abstract:

Rapid innovation has driven a dramatic increase in data production and... [Read More]
2 Replies | 621 Views
Life Tech Acquires Ion Torrent
Aug 17, 2010 - 12:37 PM - by ECO
Big news, Ion Torrent swallowed by LIFE:

http://www.marketwatch.com/story/lif...k=MW_news_stmp
15 Replies | 1,540 Views
RNA-Seq: Comprehensive comparative analysis of strand-specific RNA sequencing methods
Aug 17, 2010 - 2:00 AM - by Newsbot!
Syndicated from PubMed RSS Feeds

Comprehensive comparative analysis of strand-specific RNA sequencing methods.

Nat Methods. 2010 Aug 15;

Authors: Levin JZ, Yassour M, Adiconis X, Nusbaum C, Thompson DA, Friedman N, Gnirke A, Regev A

Strand-specific, massively parallel cDNA sequencing (RNA-seq) is a powerful tool for transcript discovery, genome annotation and expression profiling. There are multiple... [Read More]
0 Replies | 710 Views
Our new HiSeq, 1st impressions...
Aug 05, 2010 - 4:17 AM - by james hadfield
Well it finally arrived! One of only 23 so far on the googlemap, excluding those at BGI of course.

Our HiSeq has just completed it’s validation run and passed with flying colours. I have attached a couple of status pages for you to take a look at, the interface to this kind of data is much nicer than before and there is an offline tool we can use so it can be reviewed anytime.

The validation run was a pair of PE flowcells with PhiX at 36bp read lengths. We obtained 51.5 and 56.0Gb of data from the flowcells which extrapolates to just over 300Gb from the run at... [Read More]
12 Replies | 2,880 Views
Transcription Start Site Profiling from 10ng of total RNA
Jun 15, 2010 - 6:45 PM - by ECO
The folks at RIKEN just published an important study in Nature Methods (pubmed, journal) which will likely have a big impact on the study of promoter structure and activity.

They outline two methods based on their original CAGE paper and the template-switching method of ... [Read More]
0 Replies | 1,687 Views
» News Archive
Title, Username, & Date Replies Views Forum
BFAST thanks you for your help! (was: ... needs...
04-14-2010 08:09 PM
5 3,818 Bioinformatics
Free & Open Environment for NGS analysis: Galaxy...
by nekrut
03-22-2010 12:33 PM
36 6,530 Bioinformatics
AGBT Roundup / News Thread
by ECO
02-25-2010 07:21 AM
6 3,373 Events / Conferences
Paper: Fully automated process for barcoded...
by RCJK
02-16-2010 08:39 PM
4 2,812 454 (Roche, Nimblegen)
On flowcell, amplification-free RNA-seq
01-31-2010 07:27 PM
5 3,387 Literature Watch
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