BAM
From SEQwiki
| File format | BAM |
|---|---|
| Data type | alignment |
| Used by | ABySS, SAMtools, Velvet, FastQC, SeqMonk, BamTools, Newbler, CLCbio Genomics Workbench, Pindel, SeqMan NGen, BEDTools, STADEN, DNAA, Freebayes, IGV, MOSAIK, TMAP, Avadis NGS, BAMseek, Breakway, MagicViewer, Ngs backbone, MACS, Dindel, Chipster, Tablet, SeqSolve, SeqMINER, GAMES, Savant Genome Browser, GASV, BamView, Genomatix Mining Station (GMS), CopySeq, FREEC, BayesPeak, SAMStat, RTG Investigator, Syzygy, PALMapper, VarScan, GenoViewer, HeliSphere, Bcbio-nextgen, ChIP-Seq (application), Atlas Suite, Stampy, Integrated Genome Browser, SRMA, Bambino … further results |
Full text description
This is a binary form of the SAM format, taking about a quarter of the space. See also SAMtools.
Links
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References
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