BAM

From SEQwiki
Revision as of 06:05, 5 May 2010 by Maubp (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
File format BAM
Data type alignment
Used by ABySS, SAMtools, Velvet, FastQC, SeqMonk, BamTools, Newbler, CLCbio Genomics Workbench, Pindel, SeqMan NGen, BEDTools, STADEN, Avadis NGS, DNAA, Freebayes, IGV, MOSAIK, TMAP, BAMseek, Breakway, MagicViewer, Ngs backbone, MACS, Tablet, Dindel, Chipster, SeqSolve, SeqMINER, GAMES, Savant Genome Browser, GASV, BamView, Genomatix Mining Station (GMS), CopySeq, FREEC, BayesPeak, SAMStat, RTG Investigator, Syzygy, PALMapper, VarScan, GenoViewer, HeliSphere, Bcbio-nextgen, ChIP-Seq (application), Atlas Suite, Stampy, Integrated Genome Browser, SRMA, Bambino … further results

Full text description

This is a binary form of the SAM format, taking about a quarter of the space. See also SAMtools.

Links

none specified


References

none specified


To add a reference for BAM, enter the PubMed ID in the field below and click 'Add'.


[ edit box ]

Search for "BAM" in the SEQanswers forum / BioStar or:

Web Search Wiki Sites Scientific
Personal tools
Namespaces

Variants
Actions
wiki navigation
Software
Toolbox