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SEQwiki is a wiki database of software tools for NGS sequence analysis, and other cool stuff. Read more...

Software Hub 
The place to add, edit or browse the software database on SEQwiki.
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Service Providers 
Browse or edit the list of NGS service facilities.
MINSEQE 
Minimum Information about a high-throughput Sequencing Experiment
How-to Hub 
Mini reviews for the most used tools broken down by common tasks.
Most popular tools:
App. Cited Refs. Altmetric
Phred 4,199 2 0
Bowtie 4,174 2 0
BWA 3,654 1 0
SAMtools 3,218 2 0
Velvet 2,484 2 0
BLAT 2,319 1 0
ERANGE 2,289 1 0
TopHat 2,012 2 0
Cufflinks 1,684 1 0
EdgeR 1,590 5 0
… further results
Newest tools:
App. Auth. Hits
UnoSeq Krdav 986
QualiMap LuisPedroCoelho 615
CANGS Krdav 2,143
TileQC LuisPedroCoelho 1,081
TEQC Krdav 856
ShortRead Usad 2,241
Repitools Krdav 1,466
CNAseg Dan 1,649
ADTEx Krdav 1,018
Integrated Genome Browser Krdav 1,980
… further results
Developers Hub 
The place to discuss the development of the SEQwiki site and its associated data.
Publications 
Publication about SEQwiki and selected citations.
Personal tools
Namespaces

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Software
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