QualiMap

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Application data

Principal bioinformatics method(s) Sequencing quality control
Maintained? Maybe
Input format(s) SAM/BAM
Programming language(s) Java, R
Interface type(s) Command line, Desktop GUI
Resource type(s) Command-line tool

Summary: Qualimap is a platform-independent application written in Java and R that provides both a Graphical User Inteface (GUI) and a command-line interface to facilitate the quality control of alignment sequencing data.

Description

Links


References

  1. García-Alcalde F, Okonechnikov K, Carbonell J, Cruz LM, Götz S, Tarazona S, Dopazo J, Meyer TF, Conesa A.. 2012. Bioinformatics


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