|Biological application domain(s)||Exome capture|
|Principal bioinformatics method(s)||Sequencing quality control|
|Interface type(s)||Command line|
|Resource type(s)||Command-line tool|
Summary: Quality assessment of target enrichment experiments.
Quality measures comprise specificity and sensitivity of the capture, enrichment, per-target read coverage and its relation to hybridization probe characteristics, coverage uniformity and reproducibility, and read duplicate analysis. Several diagnostic plots allow visual inspection of the data quality.
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