Has anyone seen an error like this while trying to upload a bedgraph.gz to UCSC:
Warning/Error(s):
Can't start query:
select genome from dbDb where name = 'hg19'
mySQL error 2013: Lost connection to MySQL server during query
My bedGraph.gz is 283MB
head hESC.bedgraph
track type=bedGraph name=hESC
chr1 14388 14398 1
chr1 14398 14402 2
chr1 14402 14438 3
chr1 14438 14448 2
chr1 14448 14452 1
chr1 14586 14636 1
chr1 14702 14703 1
chr1 14703 14705 2
chr1 14705 14712 3
The genome was already selected as hg19 so I'm not sure why that shows up in the error message.
Any suggestions welcome!
Thanks
Warning/Error(s):
Can't start query:
select genome from dbDb where name = 'hg19'
mySQL error 2013: Lost connection to MySQL server during query
My bedGraph.gz is 283MB
head hESC.bedgraph
track type=bedGraph name=hESC
chr1 14388 14398 1
chr1 14398 14402 2
chr1 14402 14438 3
chr1 14438 14448 2
chr1 14448 14452 1
chr1 14586 14636 1
chr1 14702 14703 1
chr1 14703 14705 2
chr1 14705 14712 3
The genome was already selected as hg19 so I'm not sure why that shows up in the error message.
Any suggestions welcome!
Thanks