Hi,
I'm reading the TopHat manual. Looks like I can only use bowtie if I'd like to run TopHat. Can I run sequence alignments with BWA and then use the BWA output to run TopHat?
Thanks,
Slny
I'm reading the TopHat manual. Looks like I can only use bowtie if I'd like to run TopHat. Can I run sequence alignments with BWA and then use the BWA output to run TopHat?
Thanks,
Slny
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