Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • anyone1985
    Member
    • Mar 2009
    • 68

    #1

    where can get help information about ALLPATHS

    I have download the source code of the ALLPATHS from the MIT. But I can not find any information about how to compile or install. Where can I get the information about how to install and use?
  • Torst
    Senior Member
    • Apr 2008
    • 275

    #2
    The manual seems to be a separate download to the .tgz package:

    ftp://ftp.broad.mit.edu/pub/crd/ALLP....0.manual.docx
    Last edited by Torst; 04-05-2009, 02:40 PM. Reason: Found better information for answer.

    Comment

    • anyone1985
      Member
      • Mar 2009
      • 68

      #3
      /usr/lib/gcc/x86_64-redhat-linux/4.3.2/../../../../include/c++/4.3.2/backward/auto_ptr.h:196
      ./kmer_freq/EvaluateStrongKmers.cc:302:

      when I compile the software, it report a bug. The above files seem to be something wrong.

      Comment

      • anyone1985
        Member
        • Mar 2009
        • 68

        #4
        I think I solve the problem after I change the system language from Chinese to English.

        Comment

        • Himalaya
          Member
          • Jun 2010
          • 38

          #5
          Originally posted by anyone1985 View Post
          I think I solve the problem after I change the system language from Chinese to English.
          Hi anyone1985
          Are you running AllPaths? Does it work? What version are you using? I tried with version 3.3.2 and i always get error that says -

          Looks like the command PrepareAllPathsInput did not complete

          Did you get this error?
          What command do you give for TARGET=import and TARGET=Standard

          thanks in advance
          himalaya

          Comment

          Latest Articles

          Collapse

          • SEQadmin2
            Beyond CRISPR/Cas9: Understand, Choose, and Use the Right Genome Editing Tool
            by SEQadmin2



            CRISPR/Cas9 sparked the gene editing revolution for both research and therapeutics.1 But this system still showed severe issues that limited its applications. The most prominent were the heavy reliance on PAM sequences, delivery limitations, double-stranded breaks that prompt unintended edits and cell death, and editing inefficiency (both in targeting and in knock-in reliability).

            Despite this, “CRISPR helped turn genome editing from a specialized technique into
            ...
            07-31-2026, 11:01 AM
          • SEQadmin2
            Proteomic Platforms: How to Choose the Right Analytical Strategy to Improve Detection and Clinical Applications
            by SEQadmin2


            Proteomics platforms are evolving rapidly, with advances in mass spectrometry and affinity-based approaches expanding what researchers can detect and at what scale. As the field moves toward deeper proteome coverage and clinical applications, scientists face an increasingly complex landscape of tools. This article will explore how researchers are navigating these choices to find the right platform for their work.

            The systematic characterization of the human proteome has
            ...
            07-20-2026, 11:48 AM

          ad_right_rmr

          Collapse

          News

          Collapse

          Topics Statistics Last Post
          Started by SEQadmin2, 08-06-2026, 07:41 AM
          0 responses
          18 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 08-03-2026, 10:13 AM
          0 responses
          33 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 07-31-2026, 02:55 AM
          0 responses
          43 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 07-24-2026, 12:17 PM
          0 responses
          26 views
          0 reactions
          Last Post SEQadmin2  
          Working...