Hi all, I'm getting the following error when trying to combine bfast and bwa mapped reads. Any suggestions would be appreciated.
command:
bfast localalign -f rna.fasta -1 p1.f3.reads.bmf -2 p1.f5.reads.bfm -A 1 -t -U -n 4 > p1.reads.baf
error:
Assertion failed: (0 == strcmp(m->readName, r2_name)), function RGMatchesRead_2bmf, file RGMatches.c, line 51.
Abort trap
Assertion failed: (0 == strcmp(m->readName, r2_name)), function RGMatchesRead_2bmf, file RGMatches
command:
bfast localalign -f rna.fasta -1 p1.f3.reads.bmf -2 p1.f5.reads.bfm -A 1 -t -U -n 4 > p1.reads.baf
error:
Assertion failed: (0 == strcmp(m->readName, r2_name)), function RGMatchesRead_2bmf, file RGMatches.c, line 51.
Abort trap
Assertion failed: (0 == strcmp(m->readName, r2_name)), function RGMatchesRead_2bmf, file RGMatches
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