Seqanswers Leaderboard Ad

Collapse
X
 
  • Filter
  • Time
  • Show
Clear All
new posts
  • kovaliuk
    Junior Member
    • Jul 2012
    • 6

    2. PubMed ids in SRA and GEO [and other repositories?]

    Hello,
    We have been exploring the metadata fields in SRA and GEO. We have observed a lot of PubMed ids in SRA and GEO. (But not the reverse, i.e., the corresponding PubMed publications do not always cite the repository accession numbers for the datasets.)
    Our questions are,
    - who puts the PubMed ids into these submissions and when? Is it the data producers? Or the repository curators?
    - Who puts pubmed ids in SRA and GEO and why?

    Thank You.
  • dpryan
    Devon Ryan
    • Jul 2011
    • 3478

    #2
    Given the number of questions you've posted related to GEO and the SRA, don't you think it might be more efficient to just email or call someone that works on GEO? Their contact address is [email protected]

    Comment

    Latest Articles

    Collapse

    • seqadmin
      Pathogen Surveillance with Advanced Genomic Tools
      by seqadmin




      The COVID-19 pandemic highlighted the need for proactive pathogen surveillance systems. As ongoing threats like avian influenza and newly emerging infections continue to pose risks, researchers are working to improve how quickly and accurately pathogens can be identified and tracked. In a recent SEQanswers webinar, two experts discussed how next-generation sequencing (NGS) and machine learning are shaping efforts to monitor viral variation and trace the origins of infectious...
      03-24-2025, 11:48 AM
    • seqadmin
      New Genomics Tools and Methods Shared at AGBT 2025
      by seqadmin


      This year’s Advances in Genome Biology and Technology (AGBT) General Meeting commemorated the 25th anniversary of the event at its original venue on Marco Island, Florida. While this year’s event didn’t include high-profile musical performances, the industry announcements and cutting-edge research still drew the attention of leading scientists.

      The Headliner
      The biggest announcement was Roche stepping back into the sequencing platform market. In the years since...
      03-03-2025, 01:39 PM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by seqadmin, 03-20-2025, 05:03 AM
    0 responses
    49 views
    0 reactions
    Last Post seqadmin  
    Started by seqadmin, 03-19-2025, 07:27 AM
    0 responses
    57 views
    0 reactions
    Last Post seqadmin  
    Started by seqadmin, 03-18-2025, 12:50 PM
    0 responses
    50 views
    0 reactions
    Last Post seqadmin  
    Started by seqadmin, 03-03-2025, 01:15 PM
    0 responses
    201 views
    0 reactions
    Last Post seqadmin  
    Working...