Best java lib to connect to ncbi/genebang etc

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Tomi

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Join Date: Jul 2011

Posts: 12
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#1

Best java lib to connect to ncbi/genebang etc

09-12-2012, 02:15 AM

Hi Guys,

I am looking for a good library in java to connect to ncbi and to fetch for instance fast files etc.!

any ideas?

Best wishes,
Tomi
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TiborNagy

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Join Date: Mar 2010

Posts: 329
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#2

09-14-2012, 06:10 AM

BioJava what I suggest, but sometimes it is hard to use.
Here is the NCBI fetching API:

BioJava3 NCBISequenceReader Design

http://biojava.org/wiki/BioJava3_NCBISequenceReader_Design

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