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  • #16
    Yes I have used bowtie2, created index files, and aligned GBs of FASTQ files on this machine before!
    I will give the -f script another try....maybe there was a glitch?! :P

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    • #17
      Hi Genomax...bad news...the computer died while running the script!
      Is it possible for me to send you the links to the 2 fasta files?

      Thanks
      Joyce

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