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avilella

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Join Date: Mar 2009

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unambiguous assembly of RNAseq fastq

03-06-2010, 07:43 AM

Hi,

Does anybody know of any tool that will produce an unambiguous assembly of RNAseq fastq files and give the output back as fastq with consensus/combined scores?

By unambiguous I mean something like this in abyss:

ABYSS -k$k -b0 -t0 -e0 -c0

Cheers,

Albert.
Tags: unambiguous-assembly

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