How to annotate vcf file using annovar?

[man4ish]

Hi,

How can i annotate vcf file using Annovar?

I used following command but i found no output and all input goes to invalid file.

perl annotate_variation.pl -buildver hg19 ../input.vcf humandb/

Do i need to add some prefix in command?

[lindenb]

cross-posted https://www.biostars.org/p/131099

[GenoMax]

Have you gone through the example at the top of the page with the test data: http://www.openbioinformatics.org/an...r_startup.html