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  • GTF formats

    I am adding some annotations to a GTF (novel transcripts found from Cufflinks) and was wondering if the new GTF needs to be in sorted order? Thanks.

  • #2
    anyone have any ideas?

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    • #3
      I don't think so. Cufflinks only uses the exon entries too, if it helps. But it's easy to sort if you need to (use unix/linux sort command).

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