How to use MAQVIEW?

[ester]

I tried running maqindex with maq output from versions 0.6.8 and 0.7.1, in either case there is a segmentation error

%maqindex -i -c consensus.cns all.map
-- Indexing the alignment file 'all.map' ... Segmentation fault

Can anybody help?

[xuer]

I got a "Segmentation fault" error when i tried
./maqindex -v input.map chrI:1-200

or ./maqindex -i input.map.


Is there anybody could help me?

[ECO]

I've had this error when trying to use a newer version of maqview to view .map files from older versions of maq.

[cgjkjk]

Yes, I did.
Also ran ./zrio make XXXXX.map

[ECO]

Did you index the map with maqindex -c XXXX.cns YYYY.map ?

[cgjkjk]

Hi,
I use this MAQVIEW command "./maqview alo1564.map", to display the alignment. but system replies:

"freeglut (./maqview):unable to creat direct context rendering for window 'M.A.Q View'.
This may hurt performance.
Cannot open view on alo1564.map"


Is there anyone know what wrong is?