Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • GenoMax
    replied
    Originally posted by Richard Finney View Post
    First error is no cmake.

    Install cmake first.

    Example as root :
    apt-get install cmake
    Yikes. Missed that.

    Leave a comment:


  • Richard Finney
    replied
    First error is no cmake.

    Install cmake first.

    Example as root :
    apt-get install cmake

    Leave a comment:


  • GenoMax
    replied
    The installer is not able to find the library from bamtools in this relative path (../bamtools/lib/libbamtools.a) from where ever you are running the installation for freebayes.

    Leave a comment:


  • PandoraMid
    replied
    I've already installed bamtools!

    Leave a comment:


  • GenoMax
    replied
    You need to install bamtools. Have you done that already?

    Leave a comment:


  • PandoraMid
    started a topic Freebayes installing problem

    Freebayes installing problem

    Hi! I wish to use Freebayes to investigate on my aligned reads about any vcs, snps and similar, so i proceeded to install this program (on ubuntu) with the code
    Code:
    git clone --recursive git://github.com/ekg/freebayes.git
    cd freebayes
    make
    but this is result

    Code:
    DETECTED_VERSION = v1.0.2-16-gd466dde
    CURRENT_VERSION  = v1.0.2-16-gd466dde
    cd ../bamtools && mkdir -p build && cd build && cmake .. && make
    /bin/sh: 1: cmake: not found
    Makefile:39: set for target instuction "../bamtools/lib/libbamtools.a" failed
    make[1]: *** [../bamtools/lib/libbamtools.a] Error 127
    make[1]: exit from directory "/home/martina/freebayes/src"
    Makefile:2: set for target instuction "all" failed
    make: *** [all] Error 2
    Do you have any idea for resolve my problem?

    Thank you

Latest Articles

Collapse

  • seqadmin
    Addressing Off-Target Effects in CRISPR Technologies
    by seqadmin






    The first FDA-approved CRISPR-based therapy marked the transition of therapeutic gene editing from a dream to reality1. CRISPR technologies have streamlined gene editing, and CRISPR screens have become an important approach for identifying genes involved in disease processes2. This technique introduces targeted mutations across numerous genes, enabling large-scale identification of gene functions, interactions, and pathways3. Identifying the full range...
    08-27-2024, 04:44 AM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, Yesterday, 08:02 AM
0 responses
10 views
0 likes
Last Post seqadmin  
Started by seqadmin, 09-03-2024, 08:30 AM
0 responses
13 views
0 likes
Last Post seqadmin  
Started by seqadmin, 08-27-2024, 04:40 AM
0 responses
21 views
0 likes
Last Post seqadmin  
Started by seqadmin, 08-22-2024, 05:00 AM
0 responses
360 views
0 likes
Last Post seqadmin  
Working...
X