Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • libraries for compiling a package

    Hi everyone,

    I can not find these libraries for compiling SRA-SDK package.

    1. libz (ver1)
    2. libbz2 (ver1)
    3. libxml2 (ver2.6.7)

    Anyone know where is the best site for these libraries?

    Many thanks.

  • #2
    Try to install them directly from your system (yuml, aptitude, apt-get, etc..)
    or ask the administrator if you do not have the right...
    Francois Sabot, PhD

    Be realistic. Demand the Impossible.
    www.wikiposon.org

    Comment


    • #3
      unfortunately I'm working Mac OSX. Any further suggestion?

      Comment


      • #4
        Switch to linux... Ok, I left.

        No sorry, no idea :s
        Francois Sabot, PhD

        Be realistic. Demand the Impossible.
        www.wikiposon.org

        Comment


        • #5
          Originally posted by feng View Post
          unfortunately I'm working Mac OSX. Any further suggestion?
          Install macports. BTW you should already have those libraries on your system

          Code:
          $ file /usr/lib/libxml2.dylib  /usr/lib/libz.dylib /usr/lib/libbz2.dylib 
          /usr/lib/libxml2.dylib: Mach-O universal binary with 3 architectures
          /usr/lib/libxml2.dylib (for architecture x86_64):	Mach-O 64-bit dynamically linked shared library x86_64
          /usr/lib/libxml2.dylib (for architecture i386):	Mach-O dynamically linked shared library i386
          /usr/lib/libxml2.dylib (for architecture ppc7400):	Mach-O dynamically linked shared library ppc
          /usr/lib/libz.dylib:    Mach-O universal binary with 3 architectures
          /usr/lib/libz.dylib (for architecture x86_64):	Mach-O 64-bit dynamically linked shared library x86_64
          /usr/lib/libz.dylib (for architecture i386):	Mach-O dynamically linked shared library i386
          /usr/lib/libz.dylib (for architecture ppc7400):	Mach-O dynamically linked shared library ppc
          /usr/lib/libbz2.dylib:  Mach-O universal binary with 3 architectures
          /usr/lib/libbz2.dylib (for architecture x86_64):	Mach-O 64-bit dynamically linked shared library x86_64
          /usr/lib/libbz2.dylib (for architecture i386):	Mach-O dynamically linked shared library i386
          /usr/lib/libbz2.dylib (for architecture ppc7400):	Mach-O dynamically linked shared library ppc

          Comment


          • #6
            I'm trying with fink. Is it similar with Macprot? or can I use both of them at same time?

            Comment


            • #7
              Originally posted by feng View Post
              I'm trying with fink. Is it similar with Macprot? or can I use both of them at same time?
              First of all you should have those libraries in your system.
              Forget fink, it's a mess and quite "unelegant". MacPorts is much more integrated and related to BSD ports.

              d

              Comment


              • #8
                install Xcode. these are pretty standard development libraries.

                Comment


                • #9
                  Originally posted by lh3 View Post
                  install Xcode. these are pretty standard development libraries.
                  To be more specific, install the Developer's Tools package from the DVDs which shipped with your computer (or in the box if you have upgraded your OS). In addition to XCode (an IDE) this will install the gcc compiler set and almost all standard libraries you need. It's basically a one click install, no messing around with MacPorts.

                  EDIT:

                  O.K. I just checked my Mac OS X 10.5 DVD and I see that Heng was correct, they now call the package "XcodeTools". It is in the Optional Installs folder. (This may vary depending on which OS version you are using and whether it came with your computer or you purchased and upgrade.)
                  Last edited by kmcarr; 10-27-2010, 10:46 AM. Reason: Corrected package name

                  Comment

                  Latest Articles

                  Collapse

                  • seqadmin
                    Advancing Precision Medicine for Rare Diseases in Children
                    by seqadmin




                    Many organizations study rare diseases, but few have a mission as impactful as Rady Children’s Institute for Genomic Medicine (RCIGM). “We are all about changing outcomes for children,” explained Dr. Stephen Kingsmore, President and CEO of the group. The institute’s initial goal was to provide rapid diagnoses for critically ill children and shorten their diagnostic odyssey, a term used to describe the long and arduous process it takes patients to obtain an accurate...
                    12-16-2024, 07:57 AM
                  • seqadmin
                    Recent Advances in Sequencing Technologies
                    by seqadmin



                    Innovations in next-generation sequencing technologies and techniques are driving more precise and comprehensive exploration of complex biological systems. Current advancements include improved accessibility for long-read sequencing and significant progress in single-cell and 3D genomics. This article explores some of the most impactful developments in the field over the past year.

                    Long-Read Sequencing
                    Long-read sequencing has seen remarkable advancements,...
                    12-02-2024, 01:49 PM

                  ad_right_rmr

                  Collapse

                  News

                  Collapse

                  Topics Statistics Last Post
                  Started by seqadmin, 12-17-2024, 10:28 AM
                  0 responses
                  23 views
                  0 likes
                  Last Post seqadmin  
                  Started by seqadmin, 12-13-2024, 08:24 AM
                  0 responses
                  42 views
                  0 likes
                  Last Post seqadmin  
                  Started by seqadmin, 12-12-2024, 07:41 AM
                  0 responses
                  28 views
                  0 likes
                  Last Post seqadmin  
                  Started by seqadmin, 12-11-2024, 07:45 AM
                  0 responses
                  42 views
                  0 likes
                  Last Post seqadmin  
                  Working...
                  X