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  • Howdy: From uarray to RNA seq

    Hi all, I'm sort of making the transition from microarrays to RNA-seq (Illumina). A couple of questions that are driving me nuts:

    What is a definition for "depth" and so what??
    What is a definition for "read"?? and so what??

    Thanks

  • #2
    A read is a single sequence reaction or file.
    Depth is the number of reads that map to a region of the reference genome.

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