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  • Robert Whitfield
    Junior Member
    • Mar 2013
    • 2

    #1

    Free software that can trim .ab1 files?

    Does anyone know if there is any free software that allows trimming of .ab1 files using a quality score average window and can output .ab1 files? I think Chromas can do this, but it is not free.
  • WhatsOEver
    Senior Member
    • Apr 2012
    • 215

    #2
    I think the chromatogram explorer can do what you are looking for (http://www.dnabaser.com/download/chromatogram-explorer/)
    The lite version is freeware and has almost all features.

    Comment

    • Robert Whitfield
      Junior Member
      • Mar 2013
      • 2

      #3
      Thanks I will check it out.

      Comment

      • silviap
        Junior Member
        • Aug 2014
        • 3

        #4
        Have you tried with the software ABI Seq Scanner? Is free, but you have to do the trim manually. At the end you can save the edited .ab1 file..

        Comment

        • kuchnaii
          Junior Member
          • Mar 2015
          • 2

          #5
          Does anyone know if there is any free software that allows trimming of .ab1 files using a quality score average window and can output .ab1 files? I think Chromas can do this, but it is not free.???

          ______________
          GuL

          Comment

          • sklages
            Senior Member
            • May 2008
            • 628

            #6
            Why not SCF? Maybe lucy or Staden's pregap4?

            Comment

            • silviap
              Junior Member
              • Aug 2014
              • 3

              #7
              Sequencher

              Have you tried with Sequencher? You can use a demo version and in the section sequence>trim>trim parameters you can set your "personal trimming values", so perhaps you can save and export sequence. Try!

              Comment

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